Dalebout ML, Mead JG, Baker CS, Baker AN, van Helden AL: A new species of beaked whale Mesoplodon perrini sp. n. (Cetacea: Ziphiidae) discovered through phylogenetic analyses of mitochondrial DNA sequences. Marine Mammal Science. 2002, 18: 577-608. 10.1111/j.1748-7692.2002.tb01061.x.
Google Scholar
Gatesy J, O'Leary MA: Deciphering whale origins with molecules and fossils. Trends in Ecology and Evolution. 2001, 16: 562-570. 10.1016/S0169-5347(01)02236-4.
Google Scholar
LeDuc RG, Perrin WF, Dizon AE: Phylogenetic relationships among the delphinid cetaceans based on full cytochrome b sequences. Marine Mammal Science. 1999, 15: 619-648. 10.1111/j.1748-7692.1999.tb00833.x.
Google Scholar
Milinkovitch MC, Meyer A, Powell J J: Phylogeny of all major groups of cetaceans based on DNA sequences from three mitochondrial genes. Mol Biol Evol. 1994, 11 (6): 939-948.
CAS
PubMed
Google Scholar
Nikaido M, Matsuno F, Hamilton H, Brownell RL, Cao Y, Ding W, Zuoyan Z, Shedlock AM, Fordyce RE, Hasegawa M, Okada N: Retroposon analysis of major cetacean lineages: The monophyly of toothed whales and paraphyly of river dolphins. Proceedings of the National Academy of Sciences of the United States of America. 2001, 98: 7384-7389. 10.1073/pnas.121139198.
PubMed Central
CAS
PubMed
Google Scholar
Nikaido M, Piskurek O, Okada N: Toothed whale monophyly reassessed by SINE insertion analysis: The absence of lineage sorting effects suggests a small population of a common ancestral species. Molecular Phylogenetics and Evolution. 2007, 43: 216-224. 10.1016/j.ympev.2006.08.005.
CAS
PubMed
Google Scholar
Rosel PE, Haygood MG, Perrin WF: Phylogenetic relationships among the true porpoises (Cetacea: Phocoenidae). Molecular Phylogenetics and Evolution. 1995, 4: 463-474. 10.1006/mpev.1995.1043.
CAS
PubMed
Google Scholar
Rosenbaum HC, Brownell RL, Brown MW, Schaeff C, Portway V, White BN, Malik S, Pastene A, Patenaude NJ, Baker CS, et al: World-wide genetic differentiation of Eubalaena: questioning the number of right whale species. Molecular Ecology. 2000, 9: 1793-1802. 10.1046/j.1365-294x.2000.01066.x.
CAS
PubMed
Google Scholar
Gatesy J, Hayashi C, Cronin MA, Arctander P: Evidence from milk casein genes that cetaceans are close relatives of hippopotamid artiodactyls. Mol Biol Evol. 1996, 13: 954-963.
CAS
PubMed
Google Scholar
Nikaido M, Rooney AP, Okada N: Phylogenetic relationships among cetartiodactyls based on insertions of short and long interspersed elements; hippopotamuses are the closest extant relatives of whales. Proceedings of the National Academy of Sciences of the United States of America. 1999, 96: 10261-10266. 10.1073/pnas.96.18.10261.
PubMed Central
CAS
PubMed
Google Scholar
Thewissen JGM, Cooper LN, Clementz MT, Bajpai A, Tiwari BN: Whales originated from aquatic artiodactyls in the Eocene epoch of India. Nature. 2007, 450: 1190-1195. 10.1038/nature06343.
CAS
PubMed
Google Scholar
Árnason U, Gullberg A: Cytochrome b nucleotide sequences and the identification of five primary lineages of extant cetaceans. Mol Biol Evol. 1996, 13 (2): 407-417.
PubMed
Google Scholar
Heyning JA: Sperm whale phylogeny revisited: analysis of the morphological evidence. Marine Mammal Science. 1997, 13: 596-613. 10.1111/j.1748-7692.1997.tb00086.x.
Google Scholar
Messenger SL, McGuire JA: Morphology, molecules, and the phylogenetics of cetaceans. Systematic Biology. 1998, 47: 90-124. 10.1080/106351598261058.
CAS
PubMed
Google Scholar
Nikaido M, Matsuno F, Abe H, Shimamura M, Hamilton H, Matsubayashi H, Okada N: Evolution of CHR-SINEs in cetartiodactyl genomes: possible evidence for the monophyletic origin of tooth whales. Mammalian Genome. 2001, 12: 909-915. 10.1007/s0033501-1015-4.
CAS
PubMed
Google Scholar
Dalebout ML, Baker CS, Mead JG, Cockcroft VG, Yamada TK: A comprehensive and validated molecular taxonomy of beaked whales, family Ziphiidae. Journal of Heredity. 2004, 95: 459-473. 10.1093/jhered/esh054.
CAS
PubMed
Google Scholar
Dalebout ML, Steel D, Baker CS: Phylogeny of the beaked whale genus Mesoplodon (Ziphiidae: Cetacea) revealed by nuclear introns: implications for the evolution of male tusks. Systematic Biology. 2008, 57: 857-875. 10.1080/10635150802559257.
CAS
PubMed
Google Scholar
Gaines CA, Hare MP, Beck SE, Rosenbaum HC: Nuclear markers confirm taxonomic status and relationships among highly endangered and closely related right whale species. Proceedings of the Royal Society of London B Biological Sciences. 2005, 272: 533-542. 10.1098/rspb.2004.2895.
CAS
Google Scholar
Kasuya T: Systematic consideration of recent toothed whales based on the morphology of the tympanoperiotic bone. Scientific Reports of the Whales Research Institute, Tokyo. 1973, 25: 1-103.
Google Scholar
Caballero S, Jackson J, Mignucci-Giannoni AA, Barrios-Garrido H, Beltrán-Pedreros S, Montiel-Villalobos MG, Robertson KM, Baker CS: Molecular systematics of South American dolphins Sotalia: Sister taxa determination and phylogenetic relationships, with insights into a multi-locus phylogeny of the Delphinidae. Molecular Phylogenetics and Evolution. 2008, 46: 252-268. 10.1016/j.ympev.2007.10.015.
CAS
PubMed
Google Scholar
Agnarsson I, May-Collado LJ: The phylogeny of Cetartiodactyla: The importance of dense taxon sampling, missing data, and the remarkable promise of cytochrome b to provide reliable species-level phylogenies. Molecular Phylogenetics and Evolution. 2008, 48: 964-985. 10.1016/j.ympev.2008.05.046.
CAS
PubMed
Google Scholar
Frère CH, Hale PT, Porter L, Cockcroft VG, Dalebout ML: Phylogenetic analysis of mtDNA sequences suggests revision of humpback dolphin (Sousa spp.) taxonomy is needed. Marine and Freshwater Research. 2008, 59: 259-268. 10.1071/MF07120.
Google Scholar
Heyning JE, Perrin WF: Evidence for two species of common dolphins (genus Delphinus) from the eastern North Pacific. Contributions in Science (Los Angeles), Natural History Museum of Los Angeles County. 1994, 442: 1-35.
Google Scholar
May-Collado L, Agnarsson I: Cytochrome b and Bayesian inference of whale phylogeny. Molecular Phylogenetics and Evolution. 2006, 38: 344-354. 10.1016/j.ympev.2005.09.019.
CAS
PubMed
Google Scholar
Möller LM, Bilgmann K, Charlton-Robb K, Beheregaray L: Multi-gene evidence for a new bottlenose dolphin species in southern Australia. Molecular Phylogenetics and Evolution. 2008, 49: 647-681. 10.1016/j.ympev.2008.08.011.
Google Scholar
Perrin WF, Mitchell ED, Mead JG, Caldwell DK, Caldwell MC, van Bree PJH, Dawbin WH: Revision of spotted dolphins, Stenella spp. Marine Mammal Science. 1987, 3: 99-170. 10.1111/j.1748-7692.1987.tb00158.x.
Google Scholar
Perrin WF, Mitchell ED, Mead JG, Caldwell DK, van Bree PJH: Stenella clymene, a rediscovered tropical dolphin in the Atlantic. Journal of Mammalogy. 1981, 62: 583-598. 10.2307/1380405.
Google Scholar
Beasley I, Robertson KM, Arnold P: Description of a new dolphin, the Australian snubfin dolphin Orcaella heinsohni sp. n. (Cetacean, Delphinidae). Marine Mammal Science. 2005, 21: 365-400. 10.1111/j.1748-7692.2005.tb01239.x.
Google Scholar
Rosel PE, Dizon AE, Heyning JE: Genetic analysis of sympatric morphotypes of common dolphins (genus Delphinus). Marine Biology. 1994, 119: 159-167. 10.1007/BF00349552.
CAS
Google Scholar
Cipriano F, Palumbi SR: Genetic tracking of a protected whale. Nature. 1999, 397: 307-308. 10.1038/16823.
CAS
Google Scholar
Ross HA, Lento GM, Dalebout ML, Goode M, Ewing G, McLaren P, Rodrigo AG, Lavery S, Baker CS: DNA surveillance: web-based molecular identification of whales, dolphins, and porpoises. Journal of Heredity. 2003, 94: 111-114. 10.1093/jhered/esg027.
CAS
PubMed
Google Scholar
Vos P, Hogers R, Bleeker M, Reijans M, Lee van de T, Hornes M, Frijters A, Pot J, Peleman J, Kuiper M, Zabeau M: AFLP: a new technique for DNA fingerprinting. Nucleic Acids Research. 1995, 23: 4407-4414. 10.1093/nar/23.21.4407.
PubMed Central
CAS
PubMed
Google Scholar
Vos P, Kuiper M: AFLP Analysis. DNA markers: Protocols, Applications and Overviews. Edited by: Caetano-Annolles G, Gresshoff PM. 1996, Sussex: J. Wiley and Sons, Inc, 115-131.
Google Scholar
Albertson RC, Markert JA, Danley PD, Kocher TD: Phylogeny of a rapidly evolving clade: the cichlid fishes of Lake Malawi, East Africa. Proceedings of the National Academy of Sciences of the United States of America. 1999, 96: 5107-5110. 10.1073/pnas.96.9.5107.
PubMed Central
CAS
PubMed
Google Scholar
Allender CJ, Seehausen O, Knight ME, Turner GF, Maclean N: Divergent selection during speciation of Lake Malawi cichlid fishes inferred from parallel radiations in nuptial coloration. Proceedings of the National Academy of Sciences of the United States of America. 2003, 100: 14074-14079. 10.1073/pnas.2332665100.
PubMed Central
CAS
PubMed
Google Scholar
Seehausen O: Hybridization and adaptive radiation. Trends in Ecology and Evolution. 2004, 19: 198-206. 10.1016/j.tree.2004.01.003.
PubMed
Google Scholar
Seehausen O, Koetsier E, Schneider MV, Chapman LJ, Chapman CA, Knight ME, Turner GF, van Alphen JJM, Bills R: Nuclear markers reveal unexpected genetic variation and a Congolese-Nilotic origin of the Lake Victoria cichlid species flock. Proceedings of the Royal Society of London B Biological Sciences. 2003, 270: 129-137. 10.1098/rspb.2002.2153.
Google Scholar
Giannasi N, Thorpe RS, Malhotra A: The use of amplified fragment length polymorphism in determining species trees at fine taxonomic levels: analysis of a medically important snake, Trimeresurus albolabris. Molecular Ecology. 2001, 10: 419-426. 10.1046/j.1365-294X.2001.01220.x.
CAS
PubMed
Google Scholar
Parsons YM, Shaw KL: Species boundaries and genetic diversity among Hawaiian crickets of the genus Laupala identified using amplified fragments length polymorphism. Molecular Ecology. 2001, 10: 1765-1772. 10.1046/j.1365-294X.2001.01318.x.
CAS
PubMed
Google Scholar
Kidd MR, Kidd CE, Kocher TD: Axes of differentiation in the bower-building cichlids of Lake Malawi. Molecular Ecology. 2006, 15: 459-478. 10.1111/j.1365-294X.2005.02787.x.
CAS
PubMed
Google Scholar
Ogden R, Thorpe RS: The usefulness of amplified fragment length polymorphism markers for taxon discrimination across graduated fine evolutionary levels in Caribbean Anolis lizards. Molecular Ecology. 2002, 11: 437-445. 10.1046/j.0962-1083.2001.01442.x.
CAS
PubMed
Google Scholar
Kingston SE, Rosel PE: Genetic differentiation among recently diverged Delphinid taxa determined using AFLP markers. Journal of Heredity. 2004, 95: 1-10. 10.1093/jhered/esh010.
CAS
PubMed
Google Scholar
Koopman WJM: Phylogenetic signal in AFLP data sets. Systematic Biology. 2005, 54: 197-217. 10.1080/10635150590924181.
PubMed
Google Scholar
Adams LD, Rosel PE: Population differentiation of the Atlantic spotted dolphin (Stenella frontalis) in the western North Atlantic, including the Gulf of Mexico. Marine Biology. 2006, 148: 671-681. 10.1007/s00227-005-0094-2.
Google Scholar
Bero D: Population structure of the Atlantic spotted dolphin, (Stenella frontalis), in the Gulf of Mexico and western North Atlantic. Master's thesis. 2001, University of Charleston, SC, Biology
Google Scholar
Mirimin L, Westgate A, Rogan E, Rosel P, Read A, Coughlan J, Cross T: Population structure of short-beaked common dolphins (Delphinus delphis) in the North Atlantic Ocean as revealed by mitochondrial and nuclear genetic markers. Marine Biology. 2009, 156: 821-834. 10.1007/s00227-009-1147-8.
Google Scholar
Rosel PE, Hansen L, Hohn AA: Restricted dispersal in a continuously distributed marine species: common bottlenose dolphins Tursiops truncatusin coastal waters of the western North Atlantic. Molecular Ecology. 2009.
Google Scholar
Westgate AJ: Population structure and life history of short-beak common dolphins (Delphinus delphis) in the North Atlantic. PhD dissertation. 2005, Duke University, Marine Biology
Google Scholar
Gorgone AM, Haase PA, Griffith ES, Hohn AA: Modeling response of target and nontarget dolphins to biopsy darting. Journal of Wildlife Management. 2008, 72: 926-932.
Google Scholar
Mead JG, Potter CW: Recognizing two populations of the bottlenose dolphin (Tursiops truncatus) off the Atlantic coast of North America: morphologic and ecologic considerations. IBI Report. 1995, 5: 31-44.
Google Scholar
Rosel PE, Block BA: Mitochondrial control region variability and global population structure in the swordfish, Xiphias gladius. Marine Biology. 1996, 125: 11-22. 10.1007/BF00350756.
CAS
Google Scholar
Rosel PE, Tiedemann R, Walton M: Genetic evidence for limited trans-Atlantic movements of the harbor porpoise Phocoena phocoena. Marine Biology. 1999, 133: 583-591. 10.1007/s002270050498.
CAS
Google Scholar
Gilbert DG: Seqpup, biosequence editor and analysis platform. Bionet Software. 1995, 0.6f
Google Scholar
PE Applied Biosystems: AFLP Plant Mapping protocol. Applera. 1997
Google Scholar
Posada D: Model Test. 2005, Free Software Foundation, Boston, MA, 3.7
Google Scholar
Zwickl DJ: Genetic algorithm approaches for the phylogenetic analysis of large biological sequence datasets under the maximum likelihood criterion. PhD dissertation. 2006, University of Texas at Austin
Google Scholar
Swofford DL: PAUP* (Phylogenetic Analysis Using Parsimony *and other methods). 2000, Sinauer Associates, Inc., Sunderland, MA, 4.0b10
Google Scholar
Saitou M, Imanishi T: Relative efficiencies of the Fitch-Margoliash, Maximum-Parsimony, Maximum-Likelihood, Minimum-Evolution, and Neighbor-joining Methods of phylogenetic tree construction in obtaining the correct tree. Mol Biol Evol. 1989, 6: 514-525.
CAS
Google Scholar
Saitou N, Nei M: The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution. 1987, 4: 406-425. 10.1111/j.1096-0031.1995.tb00083.x.
CAS
PubMed
Google Scholar
Backeljau T, Bruyn LD, Wolf HD, Jordaens K, Dongen SV, Verhagen R, Winnepenninckx B: Random amplified polymorphic DNA (RAPD) and parsimony methods. Cladistics. 1995, 11: 119-130. 10.1111/j.1096-0031.1995.tb00083.x.
Google Scholar
Swofford DL, Olsen GJ: Phylogeny Reconstruction. Molecular Systematics. Edited by: Hillis DM, Moritz C. 1990, 411-501.
Google Scholar
Huelsenbeck JP, Ronquist F: MRBAYES: Bayesian inference of phylogeny. Bioinformatics. 2001, 17: 754-755. 10.1093/bioinformatics/btg180.
CAS
PubMed
Google Scholar
Ronquist F, Huelsenbeck JP: MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics. 2003, 19: 1572-1574. 10.1093/bioinformatics/btg180.
CAS
PubMed
Google Scholar
Rohlf FJ: NTSYSpc. Numerical taxonomy and multivariate analysis system. 2000, Exeter Software, Setauket, New York, 2.11i
Google Scholar
Jaccard P: Nouvelles recherches sur la distribution florale. Bulletin Société Vaudoise des Sciences Naturelles. 1908, 44: 223-270.
Google Scholar
Falush D, Stephens M, Pritchard JK: Inference of population structure using multilocus genotypes data: linked loci and correlated allele frequencies. Genetics. 2003, 164: 1567-1587.
PubMed Central
CAS
PubMed
Google Scholar
Pritchard JK, Stephens M, Donnelly P: Inference of population structure using multilocus genotype data. Genetics. 2000, 155: 945-959.
PubMed Central
CAS
PubMed
Google Scholar
Bonaccorso E, Peterson AT: A multilocus phylogeny of New World jay genera. Mol Phylogenet Evol. 2007, 42 (2): 467-476. 10.1016/j.ympev.2006.06.025.
CAS
PubMed
Google Scholar
Hare MP, Cipriano F, Palumbi SR: Genetic evidence on the demography of speciation in allopatric dolphin species. Evolution. 2002, 56: 804-816.
PubMed
Google Scholar
Edwards SV: Is a new and general theory of molecular systematics emerging?. Evolution. 2008, 63: 1-19. 10.1111/j.1558-5646.2008.00549.x.
Google Scholar
Whittall JB, Medina-Marino A, Zimmer EA, Hodges SA: Generating single-copy nuclear gene data for a recent adaptive radiation. Molecular Phylogenetics and Evolution. 2006, 39: 124-134. 10.1038/nrg1226.
CAS
PubMed
Google Scholar
Luikart G, England PR, Tallmon D, Jordon S, Taberlet P: The power and promise of population genomics: from genotyping to genome typing. Nature Reviews Genetics. 2003, 4: 981-994. 10.1016/j.tplants.2007.02.001.
CAS
PubMed
Google Scholar
Meudt HM, Clarke AC: Almost forgotten or latest practice? AFLP applications, analyses and advances. Trends in Plant Science. 2007, 12: 106-117. 10.1016/j.tplants.2007.02.001.
CAS
PubMed
Google Scholar
Palumbi SR, Baker CS: Contrasting population structure from nuclear intron sequences and mtDNA of humpback whales. Molecular Biology and Evolution. 1994, 11: 426-435. 10.1073/pnas.242585899.
CAS
PubMed
Google Scholar
Shaw KL: Conflict between nuclear and mitochondrial DNA phylogenetics of a recent species radiation: What mtDNA reveals and conceals about modes of speciation in Hawaiian crickets. Proceedings of the National Academy of Sciences of the United States of America. 2002, 99: 16122-16127. 10.1016/j.ympev.2008.03.036.
PubMed Central
CAS
PubMed
Google Scholar
Fuchs J, Pons J-M, Ericson PGP, Bonillo C, Couloux A, Pasquet E: Molecular support for a rapid cladogenesis of the woodpecker clade Malarpicini, with further insights into the genus Picus (Piciformes: Picinae). Molecular Phylogenetics and Evolution. 2008, 48: 34-46. 10.1046/j.1365-294X.2003.02070.x.
CAS
PubMed
Google Scholar
Thalmann O, Hebler J, Poinar N, Pääbo S, Vigilant L: Unreliable mtDNA data due to nuclear insertions: a cautionary tale from analysis of humans and other great apes. Molecular Ecology. 2004, 13: 321-335. 10.1111/j.1365-294X.2004.02382.x.
CAS
PubMed
Google Scholar
Thalmann O, Serre D, Hofreiter M, Lukas D, Eriksson J, Vigilant L: Nuclear insertions help and hinter the inference of the evolutionary history of gorilla mtDNA. Molecular Ecology. 2005, 14: 179-188. 10.1111/j.1556-4029.2005.00005.x.
CAS
PubMed
Google Scholar
Bless C, Palmeter H, Wallace MM: Identification of Acer rubrum using amplified fragment length polymorphism. Journal of Forensic Sciences. 2006, 51: 31-38. 10.1038/354063a0.
CAS
PubMed
Google Scholar
Schlötterer C, Amos B, Tautz D: Conservation of polymorphic simple sequence loci in cetacean species. Nature. 1991, 354: 63-65. 10.1038/354063a0.
PubMed
Google Scholar
Shimura E, Numachi KI: Genetic variability and differentiation in the toothed whales. Scientific Reports of the Whales Research Institute. 1987, 38: 141-163.
Google Scholar
Zink RM, Barrowclough GF: Mitochondrial DNA under siege in avian phylogeography. Molecular Ecology. 2008, 17: 2107-2121. 10.1111/j.1365-294X.2008.03737.x.
CAS
PubMed
Google Scholar
Hoelzel AR, Hancock JM, Dover GA: Evolution of the cetacean mitochondrial D-loop region. Mol Biol Evol. 1991, 8 (4): 475-493.
CAS
PubMed
Google Scholar
Fraser FC: Three anomalous dolphins from Blacksod Bay, Ireland. Proceedings of the Royal Irish Academy. 1940, 45: 413-455.
Google Scholar
Reyes JC: A possible case of hybridism in wild dolphins. Marine Mammal Science. 1996, 12: 301-307. 10.1111/j.1748-7692.1996.tb00581.x.
Google Scholar
Shimura E, Numachi K, Sezaki K, Hirosaki Y, Watabe S, Hashimoto K: Biochemical evidence of hybrid formation between the two species of dolphin, Tursiops truncatus and Grampus griseus. Bulletin of the Japanese Society of Scientific Fisheries. 1986, 52: 725-730.
CAS
Google Scholar
Silva JM, Silva FJL, Sazima I: Two presumed interspecific hybrids in the genus Stenella (Delphinidae) in the Tropical West Atlantic. Aquatic Mammals. 2005, 31: 468-472. 10.1578/AM.31.4.2005.468.
Google Scholar
Sylvestre J-P, Tasaka S: On the intergeneric hybrids in cetaceans. Aquatic Mammals. 1985, 11: 101-108.
Google Scholar
Carling MD, Brumfield RT: Haldane's rule in an avian system: using cline theory and divergence population genetics to test for differential introgression of mitochondrial, autosomal, and sex-linked loci across the Passerina bunting hybrid zone. Evolution. 2008, 62: 2600-2615. 10.1098/rspb.2003.2574.
CAS
PubMed
Google Scholar
Emelianov I, František M, Mallet J: Genomic evidence for divergence with gene flow in host races of the larch budmoth. Proceedings of the Royal Society of London B. 2003, 271: 97-105. 10.1098/rspb.2003.2574.
Google Scholar
Grant PR, Grant BR, Petren K: Hybridization in the recent past. The American Naturalist. 2005, 166: 56-67. 10.1101/gr.6757907.
PubMed
Google Scholar
Teeter KC, Payseur BA, Harris LW, Bakewell MA, Thibodeau LM, O'Brien JE, Krenz JG, Sans-Fuentes MA, Nachman MW, Tucker PK: Genome-wide patterns of gene flow across a house mouse hybrid zone. Genome Research. 2008, 18: 67-76. 10.1111/j.1365-294X.2007.03282.x.
PubMed Central
CAS
PubMed
Google Scholar
Vallender R, Robertson J, Friesen VL, Lovette J: Complex hybridization dynamics between golden-winged and blue-winged warblers (Vermivora chrysoptera and Vermivora pinus) revealed by AFLP, microsatellite, intron and mtDNA markers. Molecular Ecology. 2007, 16: 2017-2029. 10.1111/j.1365-294X.2007.03282.x.
CAS
PubMed
Google Scholar
Yuri T, Jernigan RW, Brumfield RT, Bhagabati NK, Braun MJ: The effect of marker choice on estimated levels of introgression across and avian (Pipridae: Manacus) hybrid zone. Molecular Ecology. 2009.
Google Scholar
Mallet J: Hybridization as an invasion of the genome. Trends in Ecology and Evolution. 2005, 20: 229-237. 10.1101/gr.5045006.
PubMed
Google Scholar
Harr B: Genomic islands of differentiation between house mouse subspecies. Genome Research. 2006, 16: 730-737. 10.1007/s10592-005-9031-7.
PubMed Central
CAS
PubMed
Google Scholar
Sellas AB, Wells RS, Rosel PE: Mitochondrial and nuclear DNA analyses reveal fine scale geographic structure in bottlenose dolphins (Tursiops truncatus) in the Gulf of Mexico. Conservation Genetics. 2005, 6: 715-728. 10.1007/s10592-005-9031-7.
CAS
Google Scholar
Rice DW: Marine Mammals of the World. 1998, Lawrence, KS: The Society for Marine Biology
Google Scholar
Natoli A, Cañadas A, Peddemors VM, Aquilar A, Vaquero C, Fernández-Piqueras P, Hoelzel AR: Phylogeography and alpha taxonomy of the common dolphin (Delphinus sp.). Journal of Evolutionary Biology. 2006, 19: 943-954. 10.1098/rsbl.2008.0168.
CAS
PubMed
Google Scholar
LeDuc R, Robertson K, Pitman R: Mitochondrial sequence divergence among Antarctic killer whale ecotypes is consistent with multiple species. Biology Letters. 2008, 4: 426-429. 10.1098/rsbl.2008.0168.
PubMed Central
PubMed
Google Scholar
Mead JG: Anatomy of the external nasal passages and facial complex in the Delphinidae (Mammalia: Cetacea). Smithsonian Contributions to Zoology. 1975, 207:
Google Scholar
Perrin WF: Spinner Dolphin Stenella longirostris. Encyclopedia of Marine Mammals. Edited by: Perrin WF, Würsig B, Thewissen JGM. 2002, San Diego, CA: Academic Press, 1174-1178.
Google Scholar
Perrin WF, JW Gilpatrick J: Spinner Dolphin Stenella longirostris (Gray, 1828). Handbook of Marine Mammals. Edited by: Ridgway SH, Harrison R. 1994, San Diego: Academic Press, 5: 99-128.
Google Scholar
Perrin WF, Mead JG: Clymene Dolphin Stenella clymene (Gray, 1846). Handbook of Marine Mammals. Edited by: Ridgway SH, Harrison R. 1994, San Diego: Academic Press, 5: 161-171.
Google Scholar
Xiong Y, Brandley MC, Xu S, Zhou K, Yang G: Seven new dolphin mitochondrial genomes and a time-calibrated phylogeny of whales. BMC Evolutionary Biology. 2009, 9: 10.1098/rspb.1998.0416.
Google Scholar
Hoelzel AR, Potter CW, Best PB: Genetic differentiation between parapatric 'nearshore' and 'offshore' populations of the bottlenose dolphin. Proceedings of the Royal Society of London B Biological Sciences. 1998, 265: 1177-1183. 10.1098/rspb.1998.0416.
CAS
Google Scholar
Natoli A, Peddemors VM, Hoelzel AR: Population structure and speciation in the genus Tursiops based on microsatellite and mitochondrial DNA analyses. Journal of Evolutionary Biology. 2004, 17: 363-375. 10.1046/j.1420-9101.2003.00672.x.
CAS
PubMed
Google Scholar
Perrin WF, Hohn AA: Pantropical Spotted Dolphin Stenella attenuata. Handbook of Marine Mammals. Edited by: Ridgway SH, Harrison R. 1994, London: Academic Press, 5: 71-98.
Google Scholar
Perrin WF, Caldwell DK, Caldwell MC: Atlantic Spotted Dolphin Stenella frontalis (G. Cuvier, 1829). Handbook of Marine Mammals. Edited by: Ridgeway SH, Harrison R. 1994, San Diego, CA: Academic Press, 5: 173-190.
Google Scholar
Hershkovitz P: Catalog of living whales. 1966, Washington, D. C.: Smithsonian Institution U. S. National Museum Bulletin 246
Google Scholar
Fraser FC, Purves PE: Hearing in cetaceans. Evolution of the accessory air sacs and the structure and function of the outer and middle ear in recent cetaceans. Bulletin of The Natural History Museum, Zoology. 1960, 7: 1-140.
Google Scholar
Arnold P, Heinsohn G: Phylogenetic status of the Irrawaddy dolphin Orcaella brevirostris (Owen in Gray): a cladistic analysis. Memoirs of the Queensland Museum. 1996, 39: 141-204.
Google Scholar
Pichler FB, Robineau D, Goodall RNP, Meyer MA, Olivarria C, Baker CS: Origin and radiation of Southern Hemisphere coastal dolphins (genus Cephalorhynchus). Molecular Ecology. 2001, 10: 2215-2223. 10.1111/j.1748-7692.1999.tb00876.x.
CAS
PubMed
Google Scholar
MacLeod CD: Niche partitioning, distribution, and competition in North Atlantic beaked whales. PhD dissertation. 2005, University of Aberdeen
Google Scholar
Perrin WF, Dolar MLL, Robineau D: Spinner dolphins (Stenella longirostris) of the western Pacific and Southeast Asia: pelagic and shallow-water forms. Marine Mammal Science. 1999, 15: 1029-1053. 10.1111/j.1748-7692.1999.tb00876.x.
Google Scholar
Cipriano F: Antitropical distribution and speciation in dolphins of the genus Lagenorhynchus: a preliminary analysis. Molecular Genetics of Marine Mammals. Edited by: Dizon AE, Chivers SJ, Perrin WF. 1997, Lawrence, KS: Society for Marine Mammalogy, 305-316.
Google Scholar
Siemann LA: Mitochondrial DNA sequence variation in North Atlantic long-finned pilot whales, Globicephala melas. PhD dissertation. 1994, Woods Hole Oceanographic Institution, Biology
Google Scholar
Wang JY, Chou L-S, White BN: Mitochondrial DNA analysis of sympatric morphotypes of bottlenose dolphins (genus: Tursiops) in Chinese waters. Molecular Ecology. 1999, 8: 1603-1612. 10.1046/j.1365-294x.1999.00741.x.
CAS
PubMed
Google Scholar