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  1. Sympatric species pairs are particularly common in freshwater fishes associated with postglacial lakes in northern temperate environments. The nature of divergences between co-occurring sympatric species, fact...

    Authors: Radka Symonová, Zuzana Majtánová, Alexandr Sember, Georg BO Staaks, Jörg Bohlen, Jörg Freyhof, Marie Rábová and Petr Ráb
    Citation: BMC Evolutionary Biology 2013 13:42
  2. Adaptation to different ecological environments is thought to drive ecological speciation. This phenomenon culminates in the radiations of cichlid fishes in the African Great Lakes. Multiple characteristic tra...

    Authors: Joost AM Raeymaekers, Pascal I Hablützel, Arnout F Grégoir, Jolien Bamps, Anna K Roose, Maarten PM Vanhove, Maarten Van Steenberge, Antoine Pariselle, Tine Huyse, Jos Snoeks and Filip AM Volckaert
    Citation: BMC Evolutionary Biology 2013 13:41
  3. Increasing genome data show that introns, a hallmark of eukaryotes, already existed at a high density in the last common ancestor of extant eukaryotes. However, intron content is highly variable among species....

    Authors: Jean-Luc Da Lage, Manfred Binder, Aurélie Hua-Van, Štefan Janeček and Didier Casane
    Citation: BMC Evolutionary Biology 2013 13:40
  4. Heterococcus is a microalgal genus of Xanthophyceae (Stramenopiles) that is common and widespread in soils, especially from cold regions. Species are characterized by extensively branched filaments produced when ...

    Authors: Nataliya Rybalka, Matthias Wolf, Robert A Andersen and Thomas Friedl
    Citation: BMC Evolutionary Biology 2013 13:39
  5. There has been a considerable increase in studies investigating rates of diversification and character evolution, with one of the promising techniques being the BiSSE method (binary state speciation and extinc...

    Authors: Matthew P Davis, Peter E Midford and Wayne Maddison
    Citation: BMC Evolutionary Biology 2013 13:38
  6. The acquisition of complex transcriptional regulatory abilities and epigenetic machinery facilitated the transition of the ancestor of apicomplexans from a free-living organism to an obligate parasite. The abi...

    Authors: Sandeep P Kishore, John W Stiller and Kirk W Deitsch
    Citation: BMC Evolutionary Biology 2013 13:37
  7. Colour vision in birds can be categorized into two classes, the ultraviolet (UVS) and violet sensitive (VS). Their phylogenetic distributions have traditionally been regarded as highly conserved. However, the ...

    Authors: Anders Ödeen and Olle Håstad
    Citation: BMC Evolutionary Biology 2013 13:36

    The Erratum to this article has been published in BMC Evolutionary Biology 2014 14:62

  8. DNA barcoding of land plants has relied traditionally on a small number of markers from the plastid genome. In contrast, low-copy nuclear genes have received little attention as DNA barcodes because of the abs...

    Authors: Yohan Pillon, Jennifer Johansen, Tomoko Sakishima, Srikar Chamala, W Brad Barbazuk, Eric H Roalson, Donald K Price and Elizabeth A Stacy
    Citation: BMC Evolutionary Biology 2013 13:35
  9. Hair is one of the main distinguishing characteristics of mammals and it has many important biological functions. Cetaceans originated from terrestrial mammals and they have evolved a series of adaptations to ...

    Authors: Zhuo Chen, Zhengfei Wang, Shixia Xu, Kaiya Zhou and Guang Yang
    Citation: BMC Evolutionary Biology 2013 13:34
  10. Ribonucleotide reductase (RNR), the enzyme responsible for the formation of deoxyribonucleotides from ribonucleotides, is found in all domains of life and many viral genomes. RNRs are also amongst the most abu...

    Authors: Bhakti Dwivedi, Bingjie Xue, Daniel Lundin, Robert A Edwards and Mya Breitbart
    Citation: BMC Evolutionary Biology 2013 13:33
  11. Wolbachia pipientis, a diverse group of α-proteobacteria, can alter arthropod host reproduction and confer a reproductive advantage to Wolbachia-infected females (cytoplasmic incompatibility (CI)). This advantage...

    Authors: Rebecca E Symula, Uzma Alam, Corey Brelsfoard, Yineng Wu, Richard Echodu, Loyce M Okedi, Serap Aksoy and Adalgisa Caccone
    Citation: BMC Evolutionary Biology 2013 13:31
  12. Sexual system is a key factor affecting the genetic diversity, population structure, genome structure and the evolutionary potential of species. The sexual system androdioecy – where males and hermaphrodites c...

    Authors: Thomas C Mathers, Robert L Hammond, Ronald A Jenner, Thorid Zierold, Bernd Hänfling and Africa Gómez
    Citation: BMC Evolutionary Biology 2013 13:30
  13. Whereas the impact of endosymbionts on the ecology of their hosts is well known in some insect species, the question of whether host communities are influenced by endosymbionts remains largely unanswered. Nota...

    Authors: Adrien Merville, Samuel Venner, Hélène Henri, Agnès Vallier, Frédéric Menu, Fabrice Vavre, Abdelaziz Heddi and Marie-Claude Bel-Venner
    Citation: BMC Evolutionary Biology 2013 13:28
  14. Molecular techniques are increasingly employed to recognize the presence of cryptic species, even among commonly observed taxa. Previous studies have demonstrated that bats using high-duty cycle echolocation m...

    Authors: Elizabeth L Clare, Amanda M Adams, Aline Z Maya-Simões, Judith L Eger, Paul DN Hebert and M Brock Fenton
    Citation: BMC Evolutionary Biology 2013 13:26
  15. Males in some species of the genus Xiphophorus, small freshwater fishes from Meso-America, have an extended caudal fin, or sword – hence their common name “swordtails”. Longer swords are preferred by females from...

    Authors: Ji Hyoun Kang, Manfred Schartl, Ronald B Walter and Axel Meyer
    Citation: BMC Evolutionary Biology 2013 13:25
  16. When studying the genetic structure of human populations, the role of cultural factors may be difficult to ascertain due to a lack of formal models. Linguistic diversity is a typical example of such a situatio...

    Authors: Valeria Montano, Veronica Marcari, Mariano Pavanello, Okorie Anyaele, David Comas, Giovanni Destro-Bisol and Chiara Batini
    Citation: BMC Evolutionary Biology 2013 13:24
  17. Explanations for bacterial biofilm persistence during antibiotic treatment typically depend on non-genetic mechanisms, and rarely consider the contribution of evolutionary processes.

    Authors: Jabus G Tyerman, José M Ponciano, Paul Joyce, Larry J Forney and Luke J Harmon
    Citation: BMC Evolutionary Biology 2013 13:22
  18. The inhabitants of deep-sea hydrothermal vents occupy ephemeral island-like habitats distributed sporadically along tectonic spreading-centers, back-arc basins, and volcanically active seamounts. The majority ...

    Authors: Shannon B Johnson, Yong-Jin Won, Julio BJ Harvey and Robert C Vrijenhoek
    Citation: BMC Evolutionary Biology 2013 13:21
  19. Inherited Copy Number Variants (CNVs) can modulate the expression levels of individual genes. However, little is known about how CNVs alter biological pathways and how this varies across different populations....

    Authors: Maria Poptsova, Samprit Banerjee, Omer Gokcumen, Mark A Rubin and Francesca Demichelis
    Citation: BMC Evolutionary Biology 2013 13:19
  20. Current biodiversity patterns are considered largely the result of past climatic and tectonic changes. In an integrative approach, we combine taxonomic and phylogenetic hypotheses to analyze temporal and geogr...

    Authors: Alexander M Weigand, Adrienne Jochum, Rajko Slapnik, Jan Schnitzler, Eugenia Zarza and Annette Klussmann-Kolb
    Citation: BMC Evolutionary Biology 2013 13:18
  21. Bacteriophage (viruses that infect bacteria) are of key importance in ecological processes at scales from biofilms to biogeochemical cycles. Close interaction can lead to antagonistic coevolution of phage and ...

    Authors: Hywel TP Williams
    Citation: BMC Evolutionary Biology 2013 13:17
  22. The number of members of the Dlx gene family increased during the two rounds of whole-genome duplication that occurred in the common ancestor of the vertebrates. Because the Dlx genes are involved in the developm...

    Authors: Satoko Fujimoto, Yasuhiro Oisi, Shigehiro Kuraku, Kinya G Ota and Shigeru Kuratani
    Citation: BMC Evolutionary Biology 2013 13:15
  23. Climatic oscillations are among the long-term factors shaping the molecular features of animals and plants and it is generally supposed that the rear edges (i.e., the low-latitude limits of distribution of any...

    Authors: Dario Patricelli, Marcin Sielezniew, Donata Ponikwicka-Tyszko, Mirosław Ratkiewicz, Simona Bonelli, Francesca Barbero, Magdalena Witek, Magdalena M Buś, Robert Rutkowski and Emilio Balletto
    Citation: BMC Evolutionary Biology 2013 13:14
  24. Invasive pest species offers a unique opportunity to study the effects of genetic architecture, demography and selection on patterns of genetic variability. Invasive Colorado potato beetle (Leptinotarsa decemline...

    Authors: Saija Piiroinen, Leena Lindström, Anne Lyytinen, Johanna Mappes, Yolanda H Chen, Victor Izzo and Alessandro Grapputo
    Citation: BMC Evolutionary Biology 2013 13:13
  25. The nematode infraorder Tylenchomorpha (Class Chromadorea) includes plant parasites that are of agricultural and economic importance, as well as insect-associates and fungal feeding species. Among tylenchomorp...

    Authors: Tahera Sultana, Jiyeon Kim, Sang-Hwa Lee, Hyerim Han, Sanghee Kim, Gi-Sik Min, Steven A Nadler and Joong-Ki Park
    Citation: BMC Evolutionary Biology 2013 13:12
  26. When beneficial mutations present in different genomes spread simultaneously in an asexual population, their fixation can be delayed due to competition among them. This interference among mutations is mainly d...

    Authors: Laura Cabanillas, María Arribas and Ester Lázaro
    Citation: BMC Evolutionary Biology 2013 13:11
  27. In stark contrast to the wealth of detail about C. elegans developmental biology and molecular genetics, biologists lack basic data for understanding the abundance and distribution of Caenorhabditis species in na...

    Authors: Marie-Anne Félix, Richard Jovelin, Céline Ferrari, Shery Han, Young Ran Cho, Erik C Andersen, Asher D Cutter and Christian Braendle
    Citation: BMC Evolutionary Biology 2013 13:10
  28. The enzyme phosphoenolpyruvate carboxykinase, PEPCK, occurs in its guanosine-nucleotide-using form in animals and a few prokaryotes. We study its natural genetic variation in Colias (Lepidoptera, Pieridae). PEPCK...

    Authors: Ward B Watt, Richard R Hudson, Baiqing Wang and Eddie Wang
    Citation: BMC Evolutionary Biology 2013 13:9
  29. Plastid genome structure and content is remarkably conserved in land plants. This widespread conservation has facilitated taxon-rich phylogenetic analyses that have resolved organismal relationships among many...

    Authors: Felix Grewe, Wenhu Guo, Emily A Gubbels, A Katie Hansen and Jeffrey P Mower
    Citation: BMC Evolutionary Biology 2013 13:8
  30. Proteomes of thermophilic prokaryotes have been instrumental in structural biology and successfully exploited in biotechnology, however many proteins required for eukaryotic cell function are absent from bacte...

    Authors: Vera van Noort, Bettina Bradatsch, Manimozhiyan Arumugam, Stefan Amlacher, Gert Bange, Chris Creevey, Sebastian Falk, Daniel R Mende, Irmgard Sinning, Ed Hurt and Peer Bork
    Citation: BMC Evolutionary Biology 2013 13:7
  31. Cnidaria (corals, sea anemones, hydroids, jellyfish) is a phylum of relatively simple aquatic animals characterized by the presence of the cnidocyst: a cell containing a giant capsular organelle with an eversi...

    Authors: Ehsan Kayal, Béatrice Roure, Hervé Philippe, Allen G Collins and Dennis V Lavrov
    Citation: BMC Evolutionary Biology 2013 13:5
  32. Competitive social interactions are ubiquitous in nature, but their genetic basis is difficult to determine. Much can be learned from single gene knockouts in a eukaryote microbe. The mutants can be competed w...

    Authors: Lorenzo A Santorelli, Adam Kuspa, Gad Shaulsky, David C Queller and Joan E Strassmann
    Citation: BMC Evolutionary Biology 2013 13:4
  33. Every year the human population encounters epidemic outbreaks of influenza, and history reveals recurring pandemics that have had devastating consequences. The current work focuses on the development of a robu...

    Authors: Victoria Svinti, James A Cotton and James O McInerney
    Citation: BMC Evolutionary Biology 2013 13:1
  34. The evolutionary history of the biota of North Africa and Arabia is inextricably tied to the complex geological and climatic evolution that gave rise to the prevalent deserts of these areas. Reptiles constitut...

    Authors: Margarita Metallinou, Edwin Nicholas Arnold, Pierre-André Crochet, Philippe Geniez, José Carlos Brito, Petros Lymberakis, Sherif Baha El Din, Roberto Sindaco, Michael Robinson and Salvador Carranza
    Citation: BMC Evolutionary Biology 2012 12:258
  35. Theories of ageing predict a trade-off between metabolism, reproduction, and maintenance. Species with low investment in early reproduction are thus expected to be able to evolve more efficient maintenance and...

    Authors: Angela Pauliny, Kjell Larsson and Donald Blomqvist
    Citation: BMC Evolutionary Biology 2012 12:257
  36. Toll-like receptors (Tlrs) are major molecular pattern recognition receptors of the innate immune system. Atlantic cod (Gadus morhua) is the first vertebrate known to have lost most of the mammalian Tlr orthologu...

    Authors: Arvind YM Sundaram, Viswanath Kiron, Joaquín Dopazo and Jorge MO Fernandes
    Citation: BMC Evolutionary Biology 2012 12:256
  37. The complex geological history of Mesoamerica provides the opportunity to study the impact of multiple biogeographic barriers on population differentiation. We examine phylogeographic patterns in a clade of lo...

    Authors: Sean M Rovito, Gabriela Parra-Olea, Carlos R Vásquez-Almazán, Roberto Luna-Reyes and David B Wake
    Citation: BMC Evolutionary Biology 2012 12:255
  38. Understanding demographic histories, such as divergence time, patterns of gene flow, and population size changes, in ecologically diverging lineages provide implications for the process and maintenance of popu...

    Authors: Yuki Mitsui and Hiroaki Setoguchi
    Citation: BMC Evolutionary Biology 2012 12:254
  39. Gene duplications have been proposed to be the main mechanism involved in genome evolution and in acquisition of new functions. Polydnaviruses (PDVs), symbiotic viruses associated with parasitoid wasps, are id...

    Authors: Céline Serbielle, Stéphane Dupas, Elfie Perdereau, François Héricourt, Catherine Dupuy, Elisabeth Huguet and Jean-Michel Drezen
    Citation: BMC Evolutionary Biology 2012 12:253
  40. Single-stranded (ss) DNA viruses in the family Geminiviridae are proving to be very useful in real-time evolution studies. The high mutation rate of geminiviruses and other ssDNA viruses is somewhat mysterious in...

    Authors: Adérito L Monjane, Daniel Pande, Francisco Lakay, Dionne N Shepherd, Eric van der Walt, Pierre Lefeuvre, Jean-Michel Lett, Arvind Varsani, Edward P Rybicki and Darren P Martin
    Citation: BMC Evolutionary Biology 2012 12:252
  41. Phenotypic evolution may occur through mutations that affect either the structure or expression of protein-coding genes. Although the evolution of color vision has historically been attributed to structural mutat...

    Authors: Kelly E O’Quin, Jane E Schulte, Zil Patel, Nadia Kahn, Zan Naseer, Helena Wang, Matthew A Conte and Karen L Carleton
    Citation: BMC Evolutionary Biology 2012 12:251

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