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Table 1 Neutral genetic diversity at nine microsatellite loci and pairwise differentiation in Arctic charr from lava caves

From: Fine scale diversity in the lava: genetic and phenotypic diversity in small populations of Arctic charr Salvelinus alpinus

Area

Cluster

Caves

Latitude

Longitude

N

NA ± SD

Ar

P Ar

HO

HE

Fis

Null Alleles

H-S

1

1

65°34′802”

17°03′032”

26

2.11±0.60

1.95

0

0.31

0.31

0.005

–

H-S

1

2

65°34′794”

17°03′035”

30

2.11±0.78

1.86

0.01

0.27

0.32

0.127

OMM1236/ OMM5146

H-S

1

3

65°34′796”

17°03′087”

15

2.22±0.83

2.02

0.01

0.25

0.26

0.033

–

H-S

1

4

65°34′812”

17°03′012”

17

1.89±0.60

1.83

0

0.49

0.33

-0.515a

–

H-N

5

5

65°35′278”

17°03′487”

56

3.33±2.06

2.78

0

0.49

0.51

0.038

BX890355/Omi179tuf

H-N

5

6

65°35′289”

17°03′502”

15

2.56±1.24

2.38

0

0.42

0.43

0.027

–

H-C

2

7

65°35′048”

17°03′385”

78

4.11±2.80

2.87

0.07

0.46

0.44

−0.044

–

H-C

2

8

65°34′986”

17°03′462”

9

2.78±0.97

2.75

0

0.53

0.48

0.109

–

H-C

2

9

65°34′965”

17°03′427”

21

3.56±1.88

3.02

0

0.51

0.51

−0.010

–

H-N

5

10

65°35′244”

17°03′481”

30

3.11±1.76

2.7

0

0.53

0.51

−0.032

–

H-N

5

11

65°35′271”

17°03′528”

48

3.33±1.58

2.82

0.02

0.48

0.51

0.053

BX890355/OMM1302/OMM1329

H-C

2

12

65°35′023”

17°03′337”

42

3.22±1.64

2.81

0.02

0.50

0.50

−0.011

–

H-C

2

13

65°35′021”

17°03′334”

14

3.33±1.50

2.96

0.06

0.55

0.55

−0.016

OMM5151

V-W

4

17

65°37′018”

17°04′262”

10

2.22±0.83

2.2

0

0.41

0.38

−0.076

–

V-W

4

17b

65°37′014”

17°04′243”

16

2.22±0.83

2.19

0

0.40

0.39

−0.039

–

V-W

4

18

65°37′030”

17°04′309”

60

2.56±0.88

2.27

0

0.40

0.38

−0.048

–

V-W r

4

19

65°36′946”

17°04′240”

26

2.89±1.05

2.66

0.01

0.47

0.45

−0.049

–

V-W

4

20

65°36′908”

17°04′239”

43

3.00±1.12

2.64

0.01

0.42

0.45

0.066

–

V-E

3

21

65°37′001”

17°03′123”

35

3.11±1.54

2.58

0.07

0.50

0.47

−0.077

–

V-E

3

22

65°37′021”

17°03′166”

71

3.78±2.17

2.69

0.02

0.44

0.47

0.049

OMM5151/OMM5146/OMM1211

V-E

3

23

65°37′034”

17°03′246”

38

3.00±1.58

2.43

0.02

0.38

0.38

−0.001

–

V-E

3

24

65°37′034”

17°03′229”

22

3.11±1.54

2.72

0.06

0.48

0.50

0.030

OMM5146

H-C

2

25

65°35′055”

17°03′416”

182

4.33±3.16

2.87

0.05

0.44

0.46

0.040

OMM1211

H-CS

1

26

65°34′896”

17°03′134”

69

3.44±1.24

2.65

0.05

0.43

0.41

−0.047

BX890355

L

Lake

Generalist

  

50

6.56±4.50

3.84

0.44

0.55

0.59

0.082

OMM5151/OMM1329

L

Lake

Krús

65°33′052”

16°56′038”

49

5.33 3.20

3.78

0.23

0.56

0.61

0.083

OMM1211/ OMM5146

  1. Fish were caught in the Haganes (H) and Vindbelgur (V) geographical areas near Lake Mývatn, Iceland. Samples of benthic (Krús) and generalist charr were also sampled from Lake Mývatn (L). The coordinates of each sampling site (cave or lake), number of individuals genotyped (N), number of alleles (NA ± SD), allelic richness (Ar, 16 genes), private allele richness (P Ar, 16 genes), observed (Ho) and expected heterozygosity (He), fixation index (FIS) and Structure cluster membership (see text for details) are shown. a Significant deviation from Hardy-Weinburg proportions
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BMC Ecology and Evolution

ISSN: 2730-7182

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