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Table 4 Model statistics for sequence diversity indices, allele pools, and supertype pools across Midas cichlid populations

From: Divergent and non-parallel evolution of MHC IIB in the Neotropical Midas cichlid species complex

Predictor df No. alleles No. supertypes π dN dS Allele pools Supertype pools
Chisq p-value Chisq p-value Sum Sq F p-value Sum Sq F p-value Sum Sq F p-value Dev p-value Dev p-value
Population 13 89.338 < 0.001 74.892 < 0.001 0.008 3.877 < 0.001 0.03 7.306 < 0.001 0.03 0.769 0.693 1858.01 0.001 472.26 0.001
Residuals 273      0.043    0.08    0.736       
Lake 5 63.275 < 0.001 54.005 < 0.001 0.005 5.768 < 0.001 0.019 12.909 < 0.001 0.015 1.139 0.340 2074.59 0.001 334.51 0.001
Habitat 3 7.847 0.049 4.67 0.198 0.003 5.506 0.001 0.008 8.761 < 0.001 0.001 0.181 0.909 694.91 0.001 45.20 0.024
Lake × Habitat 5 19.052 0.002 11.852 0.037 0.001 0.633 0.674 0.001 0.941 0.46 0.008 0.570 0.723 244.51 0.001 92.56 0.001
Residuals 273      0.043    0.080    0.736       
  1. Significant p-values are highlighted in bold