From: Whole genome based insights into the phylogeny and evolution of the Juglandaceae
Species | Total length | GC % | LSC | SSC | IR | Raw reads | Mapped reads | Sequencing Platform | GenBank No. |
---|---|---|---|---|---|---|---|---|---|
Alfaropsis roxburghiana | 161,164 | 36 | 90,477 | 18,531 | 26,087 | 10,435,597 | 261,440 | Illumina Hiseq2500 | MH188300 |
Carya cathayensis | 160,300 | 36.2 | 89,715 | 18,553 | 26,016 | 7,391,021 | 92,365 | Illumina Hiseq2500 | MH189594 |
Carya hunanensis | 160,397 | 36.2 | 89,807 | 18,532 | 26,029 | 9,303,790 | 94,317 | Illumina Hiseq2500 | MH188303 |
Carya illinoensis | 160,585 | 36.2 | 90,030 | 18,435 | 26,060 | 9,652,336 | 70,573 | Illumina Hiseq2500 | MH188302 |
Carya kweichwensis | 159,780 | 36.3 | 89,264 | 18,430 | 26,043 | 9,087,431 | 236,036 | Illumina Hiseq2500 | MH188301 |
Carya sinensis | 160,195 | 36.3 | 89,541 | 18,538 | 26,085 | 13,878,699 | 420,540 | Illumina Hiseq2500 | KX703001 |
Cyclocarya paliurus | 160,562 | 36.1 | 90,007 | 18,477 | 26,039 | 9,073,816 | 277,193 | Illumina Hiseq2500 | KY246947 |
Juglans ailantifolia | 160,353 | 36.1 | 89,931 | 18,376 | 26,023 | 12,918,979 | 145,907 | Illumina Hiseq2500 | MH188299 |
Juglans cathayensis | 159,730 | 36.1 | 89,333 | 18,351 | 26,023 | 13,178,238 | 344,843 | Illumina Hiseq2000 | KX671976 |
Juglans cinerea | 160,193 | 36.2 | 89,719 | 18,406 | 26,034 | 13,018,105 | 720,145 | Illumina Hiseq2500 | MH188298 |
Juglans hindsii | 159,929 | 36.2 | 89,597 | 18,296 | 26,018 | 29,975 | 6,646 | Roche 454 | MH188297 |
Juglans hopeiensis | 159,714 | 36.1 | 89,872 | 18,406 | 26,036 | 12,382,845 | 517,928 | Illumina Hiseq2000 | KX671977 |
Juglans major | 160,221 | 36.1 | 89,766 | 18,372 | 26,034 | 9,407,594 | 513,705 | Illumina Hiseq2500 | MH188296 |
Juglans mandshurica | 159,729 | 36.1 | 89,331 | 18,346 | 26,023 | 11,805,821 | 527,970 | Illumina Hiseq2000 | KX671975 |
Juglans microcarpa | 160,065 | 36.2 | 89,637 | 18,383 | 26,022 | 85,030 | 22,781 | Roche 454 | MH188295 |
Juglans nigra | 160,301 | 36.1 | 89,840 | 18,393 | 26,034 | 13,178,283 | 434,844 | Illumina Hiseq2500 | MH188294 |
Juglans regia | 160,367 | 36.1 | 89,872 | 18,425 | 26,035 | 3,511,124 | 1,713,581 | Illumina Miseq | KT963008 |
Juglans sigillata | 160,350 | 36.1 | 89,872 | 18,406 | 26,036 | 12,225,897 | 402,317 | Illumina Hiseq2000 | KX424843 |
Platycarya strobilacea | 158,281 | 36.1 | 87,990 | 18,399 | 25,946 | 12,345,252 | 79,584 | Illumina Hiseq2500 | MH189595 |
Pterocarya delavayi | 160,174 | 36.2 | 89,640 | 18,510 | 26,012 | 9,295,098 | 179,137 | Illumina Hiseq2500 | MH188304 |
Pterocarya fraxinifolia | 160,246 | 36.2 | 89,783 | 18,437 | 26,013 | 9,731,800 | 187,013 | Illumina Hiseq2500 | MH188291 |
Pterocarya hupehensis | 159,770 | 36.2 | 89,229 | 18,505 | 26,018 | 9,605,591 | 273,616 | Illumina Hiseq2500 | MH188293 |
Pterocarya insignis | 160,207 | 36.2 | 89,728 | 18,476 | 26,006 | 9,805,922 | 156,606 | Illumina Hiseq2500 | MH188292 |
Pterocarya macroptera | 159,941 | 36.2 | 89,517 | 18,410 | 26,007 | 9,164,994 | 113,662 | Illumina Hiseq2500 | MH188290 |
Pterocarya stenoptera | 160,202 | 36.2 | 89,727 | 18,433 | 26,021 | 11,542,884 | 186,936 | Illumina Hiseq2500 | MH188289 |
Pterocarya tonkinensis | 160,096 | 36.2 | 89,600 | 18,482 | 26,007 | 7,449,017 | 160,611 | Illumina Hiseq2500 | MH188288 |