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Table 3 Count genes occurring in parental genomes, F1-hybrid and F2-backcross genomes

From: Meiotic recombination in the offspring of Microbotryum hybrids and its impact on pathogenicity

  MSLpar MSApar A1-MSLhyb A2-MSAhyb A2-MSAhyb A1-MSAhyb A1-MSAhyb A2-MSLhyb A2-MSLhyb A2-MSLbc A2-MSLbc
Secreted Proteins 278a 273 278a (248b/1c/29d) 275 (75/145/55) 276 (65/160/51) 276 (2/242/32) 269 (3/221/45) 278 (244/0/34) 278 (248/0/30) 276 (92/141/43) 275 (124/121/30)
CAZymes 236 231 236 (226/0/10) 235 (76/124/35) 233 (64/146/23) 235 (3/219/13) 229 (2/214/5) 235 (227/0/8) 235 (227/0/8) 235 (84/128/23) 234 (127/95/12)
Sugar-Transporter 64 63 64 (63/0/1) 63 (17/38/8) 64 (22/38/4) 63 (0/62/1) 63 (0/61/2) 64 (62/0/2) 64 (63/0/1) 64 (20/41/23) 64 (32/31/3)
PFAM
 PF00067.15 Cytochrome P450 10 10 10 (10/0/0) 10 (3/6/1) 10 (2/8/0) 10 (0/10/0) 10 (0/10/0) 10 (10/0/0) 10 (10/0/0) 10 (6/4/0) 10 (8/2/0)
 PF01697.20 Glycosyltransferase family 5 5 5 (5/0/0) 5 (1/4/0) 5 (1/4/0) 5 (0/5/0) 5 (0/5/0) 5 (5/0/0) 5 (4/0/1) 5 (2/2/1) 5 (4/1/0)
 PF06280.5 Fn3-like (DUF1034) 10 10 10 (9/0/1) 10 (3/7/0) 10 (2/7/1) 10 (0/9/1) 10 (0/10/0) 10 (9/0/1) 10 (9/0/1) 10 (2/5/3) 10 (7/2/1)
 PF00646.26 F-box 7 7 7 (7/0/0) 7 (3/3/1) 7 (1/5/1) 7 (0/7/0) 7 (0/7/0) 7 (6/0/1) 7 (7/0/0) 7 (1/4/2) 7 (4/2/1)
 PF03583.7 Secretory lipase 7 6 7 (6//01) 7 (1/4/2) 7 (6/0/1) 7 (1/4/2) 6 (1/4/1) 7 (6/0/1) 7 (6/0/1) 7 (6/0/1) 7 (6/0/1)
 PF07690.9 MFS1 Major Facilitator Superfamily 119 115 118 (114/0/4) 117 (33/64/20) 118 (37/73/8) 115 (0/111/4) 115 (1/109/5) 116 (109/0/7) 116 (113/0/3) 116 (34/73/9) 116 (55/55/6)
 PF01753.11 zf-MYND finger 7 7 7 (7/0/0) 7 (3/4/0) 7 (0/7/0) 7 (0/7/0) 7 (0/7/0) 7 (7/0/0) 7 (7/0/0) 7 (0/7/0) 7 (1/6/0)
 PF00097.18 Zinc finger, C3HC4 type 14 14 14 (14/0/0) 14 (2/12/0) 14 (4/10/0) 14 (0/14/0) 14 (0/14/0) 14 (14/0/0) 14 (14/0/0) 14 (3/10/1) 14 (5/9/0)
 PF00098.16 Zinc knuckle 7 5 7 (7/0/0) 7 (3/3/1) 6 (0/4/2) 6 (1/5/0) 6 (1/5/0) 7 (7/0/0) 7 (7/0/0) 7 (4/3/0) 7 (6/0/1)
 PF07738.6 Sad1/UNC-like 2 2 2 (0/0/2) 2 (0/0/2) 2 (0/0/2) 2 (0/0/2) 2 (0/0/2) 2 (0/0/2) 2 (0/0/2) 2 (2/0) 2 (0/2)
  1. a Total count of genes; b Count of genes originating from the MSL parent; c Count of genes originating from the MSA parent; d Count of genes with “unknown origin”