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Table 2 The substitution models used in particular phylogenetic analyses. They were selected by PartitionFinder using BIC model selection, greedy search, linked branch length

From: Multiple radiations of spiny mice (Rodentia: Acomys) in dry open habitats of Afro-Arabia: evidence from a multi-locus phylogeny

Partitions RAxML MrBayes BEAST
1 CYTB_pos1 GTR + I + G GTR + I + G GTR + I + G
2 CYTB_pos2 GTR + I + G HKY + I + G HKY + I + G
3 CYTB_pos3 GTR + I + G GTR + I + G GTR + I + G
4 IRBP_pos1, RAG1_pos2 GTR + G HKY + I TrN + I
5 IRBP_pos2, RAG1_pos3 GTR + G HKY + G TrN + G
6 IRBP_pos3, RAG1_pos1 GTR + I + G HKY + I + G HKY + I + G
7 D-loop GTR + I + G GTR + I + G GTR + I + G