From: The optimality of the standard genetic code assessed by an eight-objective evolutionary algorithm
Amino acid | Amino acid index | Average | Number of codons | |||||||
---|---|---|---|---|---|---|---|---|---|---|
BLAM | BIOV | MAXF | TSAJ | NAKH | CEDJ | LIFS | MYIS | |||
Ala | 0.516 | 0.043 | 0.243 | 0.239 | 0.262 | 0.337 | 0.062 | 0.067 | 0.221 | 2 |
Arg | 0.318 | 0.498 | 0.093 | 0.207 | 0.284 | 0.012 | 0.057 | 0.400 | 0.234 | 1 |
Asn | 0.078 | 0.519 | 0.230 | 0.093 | 0.162 | 0.116 | 0.239 | 0.582 | 0.252 | 3 |
Asp | 0.047 | 0.540 | 0.062 | 0.128 | 0.244 | 0.058 | 0.305 | 0.764 | 0.269 | 5 |
Cys | 0.047 | 0.762 | 0.050 | 0.181 | 0.147 | 0.360 | 0.070 | 0.964 | 0.323 | 1 |
Gln | 0.349 | 0.513 | 0.117 | 0.015 | 0.232 | 0.070 | 0.046 | 0.612 | 0.244 | 1 |
Glu | 0.068 | 0.688 | 0.387 | 0.020 | 0.244 | 0.244 | 0.233 | 0.885 | 0.346 | 1 |
Gly | 0.484 | 0.196 | 0.338 | 0.352 | 0.070 | 0.244 | 0.233 | 0.461 | 0.297 | 4 |
His | 0.109 | 0.137 | 0.026 | 0.062 | 0.272 | 0.337 | 0.057 | 0.067 | 0.133 | 2 |
Ile | 0.391 | 0.672 | 0.010 | 0.087 | 0.525 | 0.023 | 0.430 | 0.842 | 0.372 | 1 |
Leu | 0.474 | 0.640 | 0.201 | 0.087 | 0.700 | 0.419 | 0.148 | 0.933 | 0.450 | 1 |
Lys | 0.276 | 0.873 | 0.147 | 0.096 | 0.266 | 0.198 | 0.184 | 1.188 | 0.403 | 1 |
Met | 0.411 | 0.529 | 0.303 | 0.099 | 0.064 | 0.302 | 0.087 | 0.721 | 0.315 | 1 |
Phe | 0.130 | 0.873 | 0.099 | 0.209 | 0.360 | 0.128 | 0.120 | 0.964 | 0.360 | 1 |
Pro | 3.089 | 0.233 | 0.320 | 0.096 | 0.183 | 0.035 | 0.349 | 0.764 | 0.634 | 1 |
Ser | 0.068 | 0.498 | 0.194 | 0.217 | 0.035 | 0.186 | 0.117 | 0.552 | 0.233 | 16 |
Thr | 0.078 | 0.328 | 0.146 | 0.105 | 0.019 | 0.035 | 0.048 | 0.279 | 0.130 | 16 |
Trp | 0.120 | 0.640 | 0.008 | 0.367 | 0.168 | 0.442 | 0.280 | 0.812 | 0.355 | 1 |
Tyr | 0.266 | 0.153 | 0.200 | 0.226 | 0.112 | 0.221 | 0.275 | 0.691 | 0.268 | 1 |
Val | 0.172 | 0.524 | 0.026 | 0.023 | 0.445 | 0.209 | 0.424 | 0.691 | 0.314 | 1 |