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Table 1 Domains with different intra-group similarities for hypoxia-tolerant (HT) and hypoxia-sensitive (HS) taxa

From: Adaptive patterns in the p53 protein sequence of the hypoxia- and cancer-tolerant blind mole rat Spalax

 

Evolutionary tree

TAD1

TAD2

PRD

DBD

NLS

TDRD

U obs

35

49

12

74

9

50

3

p MW

0.2791

0.4844

0.0015

0.0313

0.0005

0.4861

0.0001

p MW -FDR

 

0.4861

0.0029

0.0468

0.0015

0.4861

0.0003

p MC

0.413

0.4895

0.0095

0.0768

0.0046

0.4882

0.0005

p MC -FDR

 

0.4895

0.019

0.1152

0.0140

0.4895

0.0030

  1. Statistics U and p-values were calculated for domain sequences of p53 and for evolutionary tree positions (see Methods). P MW for p53 domains corresponds to p-value calculated in a standard one-tailed Mann–Whitney test [46]. P MC correspond to p-values calculated in our extension on U test using Monte-Carlo simulations (see Methods). As can be seen it the table, the estimated ‘divergence time’ calculated based on evolutionary tree is unlikely to explain differences between the HT and HS groups, seen in the TAD2, DBD, and TDRD domains