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Table 3 List of ABC-protein encoding genes significantly up-regulated in mycorrhiza-forming mycelium (MYC) as compared to free-living mycelium (FLM)

From: Diversity and evolution of ABC proteins in mycorrhiza-forming fungi

Species Protein model Subfamily Gene name Fold change p-value Mean FLM Mean MYC
Laccaria bicolor 601729 ABC-B (FL) LacbiABCB2.1b 6.08 0 1097 6671
  671922 ABC-B (HT) LacbiABCB6.1 36.94 1.82E-14 957 35334
  327599 Ydr061w LacbiABCI2.1a 7.89 1.50E-05 328 2590
  298087 Ydr061w LacbiABCI2.1d 5.90 0 504 2972
Oidiodendron maius 101847 ABC-A OidmaABCA1.2 3.66 1.35E-05 5.5 20.1
  104750 ABC-B (FL) OidmaABCB2.3a 3.60 3.02E-32 35.0 125.9
  101864 ABC-C OidmaABCC3.1 2.51 9.82E-05 14.5 36.5
  106945 ABC-C OidmaABCC5.1 m 14.29 1.49E-12 5.1 72.5
  173820 ABC-C OidmaABCC5.1n 8.32 0.029 1.0 8.2
  102203 ABC-C OidmaABCC7.1a 2.11 0.004 13.7 29.0
  119877 ABC-G OidmaABCG6.2a 73.40 3.02E-20 0.5 33.9
  123273 ABC-G OidmaABCG6.2b 15.31 6.58E-20 6.2 95.5
Sebacina vermispora 326231 ABC-B (HT) SebveABCB6.1a 2.63 5.24E-05 13.2 34.6
  19794 ABC-B (HT) SebveABCB6.1b 2.42 9.07E-05 11.5 27.9
  127786 ABC-B (HT) SebveABCB6.3 6.44 8.34E-05 7.2 46.3
  116826 ABC-C SebveABCC3.2e 2.06 0.002 13.6 28.1
  29919 ABC-C SebveABCC7.3 3.79 2.17E-13 12.8 48.7
  71362 ABC-F SebveABCF1.1 2.39 5.06E-06 66.3 158.9
  333124 ABC-F SebveABCF2.1 2.68 3.60E-13 26.6 71.2
  17618 ABC-G SebveABCG6.1 2.98 5.32E-06 35.4 105.7
  174708 Ydr061w SebveABCI2.1 2.87 1.08E-04 10.0 28.6
  69180 Ydr061w SebveABCI3.1 2.03 4.37E-04 39.1 79.5
Tulasnella calospora 19492 ABC-B (FL) TulcaABCB2.1a 2.11 2.91E-05 27.7 58.5
  207894 ABC-B (FL) TulcaABCB2.1d 2.46 1.80E-04 32.4 79.6
  161653 ABC-B (FL) TulcaABCB2.1e 2.43 0.001 18.4 44.8
  22503 ABC-B (HT) TulcaABCB6.1a 2.13 0.014 7.4 15.8
  78312 ABC-B (HT) TulcaABCB6.1b 3.75 6.96E-04 8.0 30.0
  229331 ABC-B (HT) TulcaABCB6.3b 2.84 0 37.5 106.4
  3597 ABC-C TulcaABCC6.1 4.39 0.002 20.1 88.1
  22078 ABC-C TulcaABCC7.2 4.99 1.85E-04 4.4 22.1
  72157 ABC-F TulcaABCF5.1 58.44 0.021 5.2 302.4
  80372 ABC-G TulcaABCG4.1b 5.72 5.80E-06 17.4 99.3
  69109 Ydr061w TulcaABCI2.1 4.67 4.32E-05 4.0 18.6
  243146 Ydr061w TulcaABCI3.1 3.56 4.77E-09 14.3 50.9
Suillus luteus 17399 ABC-A SuiluABCA1.1 4.16 4.23E-10 10.5 43.7
  621910 ABC-A SuiluABCA1.1 3.51 5.79E-05 6.5 22.8
  797578 ABC-B (FL) SuiluABCB2.1a 2.12 7.14E-08 34.6 73.4
  107869 ABC-F SuiluABCF3.1 2.28 1.08E-05 19.8 45.2
Paxillus involutus 111294 ABC-B (FL) PaxinABCB2.1c 4.21 5.22E-05 6.0 25.2
  80655 ABC-G PaxinABCG2.1e 11.01 0.004 10.2 112.1
  117609 ABC-G PaxinABCG2.1f 4.68 4.59E-07 7.5 35.0
Piloderma croceum 99185 ABC-B (FL) PilcrABCB2.1e 3.63 1.06E-46 52.2 189.1
  4675 ABC-B (HT) PilcrABCB6.2a 3.20 1.61E-06 9.0 28.7
  603979 ABC-G PilcrABCG6.2 11.34 6.80E-07 1.2 13.3
Hebeloma cylindrosporum 19666 ABC-C HebcyABCC7.2b 5.61 1.09E-05 3.4 18.9
  449030 ABC-D HebcyABCD1.1 3.22 0.020 6.2 20.0
  448391 ABC-G HebcyABCG6.2 5.99 3.75E-04 9.9 59.4