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Table 1 Species, genes and GenBank accession numbers used in the phylogenetic analysis

From: Unexpected co-linearity of Hox gene expression in an aculiferan mollusk

Species name/Abbreviation Phylum Gene Name Accession Number
Acanthochitona crinita/Acr Mollusca Acr_Hox1 KR190463
Acr_Hox2 KR190464
Acr_Hox3 KR190465
Acr_Hox4 KR190466
Acr_Hox5 KR190467
Acr_Hox7 KR190468
Acr_Post2 KR190469
Branchiostoma floridae/Bfl Chordata Bfl_Hox1 BAA78620
Bfl_Hox2 BAA78621
Bfl_Hox4 BAA78622
Bfl_Hox5 ABX39489
Bfl_Hox7 ABX39491
Bugula turrita/Btu Bryozoa (Ectoprocta) Btu_Hox2 AAS77225
Btu_Hox3 AAS77226
Btu_Hox4a AAS77227
Btu_Hox4b AAS77228
Btu_Post2 AAS77230
Caenorhabditis elegans/Cel Nematoda Cel_Hox1 CAA34929
Ciona intestinalis/Cin Chordata Cin_Hox1 NP_001122333
Cin_Hox2 CAD59668
Cin_Hox4 NP_001027781
Cin_Hox5 NP_001027665
Drosophila melanogaster/Dme Arthropoda Dme_Hox1 CAB57787
Dme_Hox2 CAA45271
Dme_Hox3 P09089
Dme_Hox4 P07548
Dme_Hox5 NP_524248
Dme_Hox7 CAA27417
Dme_Dll NP_726486
Euprymna scolopes/Esc Mollusca Esc_Hox1 AAL25804
Esc_Hox3 AAR16188
Esc_Hox5 AAR16189
Esc_Hox7 AAL25809
Esc_Post2 AAL25812
Flaccisagitta enflata/Fen Chaetognatha Fen_Hox1 ABS18809
Fen_Hox3 ABS18810
Fen_Hox4 ABS18811
Fen_Hox5 ABS18812
Gibbula varia/Gva Mollusca Gva_Hox1 ACX84671
Gva_Hox2 ADJ18233
Gva_Hox3 ADJ18232
Gva_Hox4 ACX84672
Gva_Hox5 ADJ18234
Gva_Hox7 ADJ18235
Gva_Post2 ACX84674
Haliotis asinina/Has Mollusca Has_Hox3 AAK17185
Has_Hox4 AAK11240
Has_Hox5 AAF78248
Lingula anatina/Lan Brachiopoda Lan_Hox1 AAD45587
Lan_Hox3 AAD45588
Lan_Hox5 AAD45589
Lan_Hox7 AAD45590
Lan_Post2 AAD45595
Lithobius atkinsoni/Lat Arthropoda Lat_Hox1 AAL36907
Lat_Hox2 AAL36908
Lat_Hox3 AAL36906
Lat_Hox4 AAL36902
Lat_Hox5 AAL36909
Lat_Hox7 AAL36901
Lineus sanguineus/Lsa Nemertea Lsa_Hox1 CAA76295
Lsa_Hox3 CAA76296
Mus musculus/Mmu Chordata Mmu_Hox1 NP_034579
Mmu_Hox2 NP_034581
Mmu_Hox3 NP_034582
Mmu_Hox4 NP_032291
Mmu_Hox5 NP_034583
Mmu_Hox7 NP_034585
Nymphon gracile/Ngr Arthropoda Ngr_Hox1 ABD46723
Ngr_Hox2 ABD46725
Ngr_Hox5 ABD46729
Ngr_Hox7 ABD46732
Nereis virens/Nvi Annelida Nvi_Hox1 AAD46166
Nvi_Hox2 AAD46167
Nvi_Hox4 AAD46169
Nvi_Hox5 AAD46170
Nvi_Hox7 ABD04657
Nvi_Post2 AAD46176
Platynereis dumerilii/Pdu Annelida Pdu_Hox3 ABD04656
Pdu_Hox4 ABD04658
Pdu_Hox5 ABD04660
Pdu_Post2 ABD04651
Pdu_Dlx1 CAJ38799
Sacculina carcini/Sca Arthropoda Sca_Hox1 ABB46347
Sca_Hox2 AAD00340
Sca_Hox4 AAD00345
Sca_Hox5 AAM50457
Saccoglossus kowalevskii/Sko Hemichordata Sko_Hox1 AAP79296
Sko_Hox2 ABK00018
Sko_Hox3 AAP79286
Sko_Hox4 AAP79297
Sko_Hox5 ABK00019
Sko_Hox7 AAP79287
Symsagittifera roscoffensis/Sro Acoelomorpha Sro_Hox1 AAN11404
Tribolium castaneum/Tca Arthropoda Tca_Hox1 NP_001107762
Tca_Hox3 AAK16424
Tca_Hox4 AAK16423
Tca_Hox5 AAK16422