Phylogeography and evolutionary history of the Crocidura olivieri complex (Mammalia, Soricomorpha): from a forest origin to broad ecological expansion across Africa

Jacquet, François; Denys, Christiane; Verheyen, Erik; Bryja, Josef; Hutterer, Rainer; Kerbis Peterhans, Julian C; Stanley, William T; Goodman, Steven M; Couloux, Arnaud; Colyn, Marc; Nicolas, Violaine

doi:10.1186/s12862-015-0344-y

Table 1 Genetic distances within the Crocidura olivieri complex

From: Phylogeography and evolutionary history of the Crocidura olivieri complex (Mammalia, Soricomorpha): from a forest origin to broad ecological expansion across Africa

	I	II	III	IV	V	VI	VII	VIII
a)
I	0.45 [0–1.0]	1.34	1.50	2.26	4.13	3.98	4.43	3.51
I	0.54 [0–1.6]	[0.6-2.1]	[0.9-3.0]	[1.2-3.4]	[2.9-5.2]	[3.2-4.7]	[3.5-5.6]	[3.0-4.2]
II	1.61	0.51 [0–1.4]	2.01	2.70	4.48	4.26	4.78	3.99
II	[1.0-2.7]	0.56 [0–1.7]	[1.1-3.0]	[1.5-3.5]	[2.8-5.8]	[3.0-5.2]	[4.1-5.5]	[3.0-4.7]
III	1.91	2.35	1.12 [0–1.9]	2.43	4.36	4.35	4.82	3.79
III	[1.0-3.6]	[1.5-4.2]	1.40 [0–2.9]	[1.6-3.4]	[3.1-5.2]	[3.5-5.3]	[3.6-6.8]	[3.1-4.6]
IV	2.62	2.92	2.82	1.78 [0–2.7]	4.65	4.58	4.78	3.98
IV	[1.5-4.2]	[2.1-4.3]	[1.6-4.2]	1.95 [0–4.0]	[3.3-5.4]	[3.5-5.4]	[4.1-5.6]	[3.2-4.5]
V	4.52	4.69	4.75	4.67	1.26 [0.1-2.3]	4.78	4.90	4.79
V	[3.5-5.7]	[3.9-6.6]	[3.5-6.0]	[3.5-6.0]	1.12 [0–2.4]	[4.1-5.8]	[4.2-5.6]	[4.1-5.6]
VI	4.54	4.66	4.91	4.83	4.92	0.65 [0.5-0.8]	3.89	4.09
VI	[3.5-5.6]	[4.0-5.7]	[4.0-6.4]	[3.9-6.6]	[4.0-6.2]	0.63 [0–1.5]	[3.6-4.4]	[3.9-4.3]
VII	4.22	4.57	4.60	4.57	4.68	3.75	0.32	3.58
VII	[3.4-5.2]	[4.0-5.2]	[3.4-6.4]	[3.9-5.3]	[4.0-5.2]	[3.4-4.1]	0.30	[3.4-3.9]
VIII	3.92	4.19	4.20	4.08	4.69	4.14	3.45	0.47
VIII	[2.3-5.1]	[3.8-5.0]	[3.3-5.9]	[3.3-5.3]	[3.9-5.4]	[3.8-5.1]	[3.2-3.8]	0.47
b)
I	0.75 [0–1.4]	2.59	2.80	3.28	3.93	5.23	5.09	4.82
I	0.75 [0–1.4]	[1.4-3.4]	[0.5-3.7]	[1.6-4.6]	[1.6-6]	[3.8-5.7]	[3.3-5.8]	[3.8-5.3]
II	2.54	0.65 [0–1.6]	2.15	2.80	4.62	4.48	4.30	4.65
II	[1.4-3.3]	0.63 [0–1.5]	[1.2-3.0]	[1.6-4.1]	[3.5-5.2]	[4.0-4.8]	[3.6-4.8]	[4.0-5.2]
III	2.79	2.10	0.49 [0–1.0]	2.37	4.24	3.71	3.66	4.02
III	[1.4-3.6]	[1.2-2.9]	0.49 [0–1.0]	[1.6-3.8]	[3.5-4.9]	[3.5-4.0]	[3.1-4.3]	[3.8-4.5]
IV	3.23	2.77	2.37	1.39 [0–3.0]	4.59	4.06	3.78	4.47
IV	[1.5-5.8]	[1.5-4.9]	[1.7-4.9]	1.31 [0–2.8]	[3.0-6.0]	[3.5-5.0]	[3.0-4.8]	[3.3-5.5]
V	4.91	4.46	4.08	4.44	1.20 [0–2.2]	4.55	4.45	4.43
V	[3.5-5.7]	[3.4-4.9]	[3.4-4.7]	[3.1-5.7]	1.15 [0–1.7]	[4.0-5.1]	[3.8-5.0]	[3.7-5.1]
VI	4.92	4.28	3.74	4.06	4.38	0.21 [0–0.3]	2.16	4.10
VI	[3.5-5.6]	[3.4-4.9]	[3.4-4.6]	[2.9-5.4]	[3.8-4.8]	0.34 [0–1.1]	[2.0-2.2]	[4.1-4.1]
VII	4.88	4.14	3.54	3.68	4.30	2.84	0.30	3.60
VII	[3.2-5.5]	[3.5-4.6]	[3.0-4.1]	[2.9-4.6]	[3.8-4.8]	[2.0-4.6]	0.30	3.60
VIII	4.61	4.42	3.86	4.31	4.27	4.04	3.50	0.20
VIII	[3.7-5.1]	[3.8-4.9]	[3.7-4.3]	[3.2-5.2]	[3.5-4.9]	[3.8-4.4]	3.50	0.20

Genetic distances (K2P above and uncorrected p-distances below diagonal) between and within clades of the C. olivieri complex for cytb (1a) and COI markers (1b) with mean and range within brackets.

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