Table 3 Arabidopsis microsatellite genetic variation
From: Taming the wild: resolving the gene pools of non-model Arabidopsislineages
Taxon | Ploidy | Mating system | Individuals (populations) | No. of alleles | Mean no. of alleles per locus (SD)2 | No. of unique alleles | No. of rare alleles (5%) |
|---|---|---|---|---|---|---|---|
A. arenicola | Diploid | SC | 19 (14) | 17 | 1.04 (0.10) | - | - |
A. lyrata subsp. lyrata | Diploid | SI/SC1 | 57 (29) | 38 | 1.18 (0.16) | - | - |
A. petraea susbp. umbrosa | Diploid | Unknown | 25 (16) | 29 | 1.20 (0.26) | - | 2 |
A. petraea subsp. septentrionalis | Tetraploid | Unknown | 8 (8) | 36 | 1.63 (0.31) | 2 | 2 |
A. lyrata subsp. petraea | Diploid | SI | 187 (13) | 89 | 1.46 (0.19) | 10 | 13 |
A. lyrata subsp. petraea | Tetraploid | SI | 25 (5) | 57 | 1.93 (0.37) | - | - |
A. arenosa subsp. arenosa | Tetraploid | SI | 76 (13) | 94 | 2.31 (0.33) | 2 | 5 |
A. arenosa subsp. arenosa var. intermedia | Tetraploid | SI | 14 (4) | 44 | 2.19 (0.27) | - | - |
A. arenosa subsp. borbasii | Tetraploid | SI | 160 (22) | 111 | 2.30 (0.33) | 7 | 9 |
A. carpatica | Diploid | SI | 113 (9) | 104 | 1.59 (0.19) | 6 | 10 |
A. petrogena subsp. petrogena | Diploid | SI | 73 (7) | 73 | 1.53 (0.20) | - | 3 |
A. petrogena subsp. exoleta | Tetraploid | SI | 56 (11) | 83 | 2.22 (0.36) | 1 | 5 |
A. neglecta subsp. neglecta | Diploid | SI | 35 (5) | 51 | 1.51 (0.21) | 1 | 3 |
A. neglecta subsp. robusta | Tetraploid | SI | 8 (1) | 39 | 2.24 (0.23) | - | 2 |
A. nitida | Diploid | SI | 22 (4) | 59 | 1.54 (0.22) | 3 | 3 |
A. croatica | Diploid | SI | 15 (3) | 26 | 1.33 (0.19) | 1 | 1 |
A. halleri subsp. dacica | Diploid | SI | 3 (3) | 15 | 1.53 (0.31) | - | - |
A. halleri subsp. halleri | Diploid | SI | 199 (19) | 59 | 1.37 (0.19) | 6 | 7 |
A. halleri subsp. ovirensis | Diploid | SI | 24 (4) | 18 | 1.31 (0.16) | 1 | 1 |
A. halleri subsp. tatrica | Diploid | SI | 25 (7) | 40 | 1.37 (0.14) | - | 1 |
A. halleri subsp. gemmifera | Diploid | SI | 8 (5) | 15 | 1.10 (0.15) | - | - |
A. cebennensis | Diploid | SI | 153 (11) | 23 | 1.17 (0.14) | - | - |
A. pedemontana | Diploid | SI | 40 (9) | 22 | 1.31 (0.18) | - | 1 |