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Table 2 Primer sets

From: Phylogeography of the land snail genus Orcula(Orculidae, Stylommatophora) with emphasis on the Eastern Alpine taxa: speciation, hybridization and morphological variation

Region

Primer (5′ to 3′)

Origin

Fragment size

T°C RocheTaq

COI fwd

COIfolmerFw: GGTCAACAATCATAAAGATATTGG

[54]

655 bp

50°C

COI rev

H2198-Alb: TATACTTCAGGATGACCAAAAAATC

[55]

  

12S fwd

12SGastFw: TTACCTTTTGCATAATGGTTAAACTA

[56]

669 - 725 bp

54°C

12S rev

12SGastRv: CGGTCTGAACTCAGATCATG

[56]

  

16S fwd

16SLOrc1_fwd: TTACCTTTTGCATAATGGTTAAACTA

[19]

838 - 890 bp

54°C

 

16SLOrc2_fwd: TTACCTTTTGCATAATGGTTAAATTA

[19]

  

16S rev

16SLOrc_rev: CGGTCTGAACTCAGATCATG

[19]

  

H4 / H3 fwd

OrcH4_left1: GTGCGTCCCTGGCGCTTCA

[19]

848 - 1095 bp

57°C

 

OrcH4_left2: GGCGCTTCAGGGCGTACACT

[19]

  

H4 / H3 rev

OrcH3_right1: TGGGCATGATGGTGACACGCT

[56]

 

Finnzymes

Phusion: 71°C

intern fwd

OrcH4S_left3: CGGTCTGAACTCAGATCATG

[19]

  

intern rev

OrcH3S_right3: CGGTCTGAACTCAGATCATG

[19]

  
  1. Primer sequences for amplification and sequencing of the COI, 12S, 16S and H4/H3 fragments. The H4/H3 fragments were amplified with Finnzymes Phusion polymerase, wherefore the respective annealing temperatures are provided in addition.