Region | Primer (5′ to 3′) | Origin | Fragment size | T°C RocheTaq |
---|---|---|---|---|
COI fwd | COIfolmerFw: GGTCAACAATCATAAAGATATTGG | [54] | 655 bp | 50°C |
COI rev | H2198-Alb: TATACTTCAGGATGACCAAAAAATC | [55] | ||
12S fwd | 12SGastFw: TTACCTTTTGCATAATGGTTAAACTA | [56] | 669 - 725 bp | 54°C |
12S rev | 12SGastRv: CGGTCTGAACTCAGATCATG | [56] | ||
16S fwd | 16SLOrc1_fwd: TTACCTTTTGCATAATGGTTAAACTA | [19] | 838 - 890 bp | 54°C |
16SLOrc2_fwd: TTACCTTTTGCATAATGGTTAAATTA | [19] | |||
16S rev | 16SLOrc_rev: CGGTCTGAACTCAGATCATG | [19] | ||
H4 / H3 fwd | OrcH4_left1: GTGCGTCCCTGGCGCTTCA | [19] | 848 - 1095 bp | 57°C |
OrcH4_left2: GGCGCTTCAGGGCGTACACT | [19] | |||
H4 / H3 rev | OrcH3_right1: TGGGCATGATGGTGACACGCT | [56] | Finnzymes | |
Phusion: 71°C | ||||
intern fwd | OrcH4S_left3: CGGTCTGAACTCAGATCATG | [19] | ||
intern rev | OrcH3S_right3: CGGTCTGAACTCAGATCATG | [19] |