Table 1 Parameters and statistics summary of phylogenetic analyses
| Â | cyt b | Â | Â | |||
|---|---|---|---|---|---|---|
Codon position | 1st | 2nd | 3rd | allpos | S7 | cyt b + S7 |
MP analysis | Â | Â | Â | Â | Â | Â |
Number of sites | 380 | 380 | 380 | 1140 | 965 | 2105 |
Number of variables sites | 74 | 31 | 320 | 424 | 279 | 675 |
Parsimony-informative sites | 34 | 2 | 243 | 279 | 103 | 365 |
Most parsimonious trees | - | - | - | 1 | 1 | 1 |
Tree length | - | - | - | 879 | 343 | 1183 |
Consistency index | - | - | - | 0.622 | 0.907 | 0.693 |
Retention index | - | - | - | 0.830 | 0.819 | 0.666 |
BI analyses | Â | Â | Â | Â | Â | Â |
Model (BIC) | TrNef+G | HKY | TrN+G | TrN+G | HKY+G | - |
Nucleotide proportions | A = 24% | A = 20% | A = 35% | A = 26% | A = 31% | - |
| Â | C = 25% | C = 26% | C = 34% | C = 29% | C = 15% | - |
| Â | G = 26% | G = 13% | G = 11% | G = 17% | G = 20% | - |
| Â | T = 25% | T = 40% | T = 20% | T = 28% | T = 34% | - |
χ2 test of base frequencies | χ2 = 4.62 | χ2 = 1.28 | χ2 = 1.28 | χ2 = 21.68 | χ2 = 3.71 | - |
| Â | gl = 153 | gl = 153 | gl = 153 | gl = 153 | gl = 54 | Â |
| Â | p = 1.00 | p = 1.00 | p = 1.00 | p = 1.00 | p = 1.00 | Â |
Alpha | 0.23 | t.i. | 2.45 | 0.21 | 1.41 | - |