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Table 4 Amino acid changes associated with the divergence of human bestrophins

From: Molecular evolution and functional divergence of the bestrophin protein family

Comparison

Codon position in human Best1a

Codon position and amino acid residueb

Codon position and amino acid residueb

Protein domainc

Best1 vs. Best4

 

in vertebrate Best1

in vertebrate Best4

 
 

264

264: Y, conserved

279: P, Q, S, L, E, G or Y

Loop 3

 

265*

265: P, conserved

280: A, T, Q, E or K

Loop 3

 

266

266: G, conserved

281: L, A, V, P, K, E or D

Loop 3

 

267

267: H, conserved

282: G, W, P or H

Loop 3

 

331*

331: R, P, V, I, L or M

346: P, conserved

C-terminus

 

343

343: P, conserved

358: P, A, F or V

C-terminus

 

349

349: A, conserved

364: V, I, L, P, Q or A

C-terminus

Best2 vs Best4

 

in vertebrate Best2

in vertebrate Best4

 
 

45*

45: A, conserved

45: V, L, M, F or T

TMD2

 

52*

52: F, conserved

52: L, K, R, C or F

Loop 1

 

59

59: K, conserved

59: R, K or Q

Loop 1

 

61*

61: Y, conserved

61: V, I, L, M or E

Loop 1

 

66

66: V, A or S

66: A, conserved

Loop 1

 

91

91: N or H

91: N, conserved

Loop 2

 

106

106: L or V

106: L, conserved

Loop 2

 

132

132: A, S or C

132: A, conserved

Loop 2

 

206

206: A, T or S

206: A, conserved

Loop 2

 

207*

207: L, F or Y

207: L, conserved

Loop 2

 

263*

263: G, conserved

263: G, E, A or P

Loop 3

 

264

264: Y, conserved

279: P, E, Q, G, S or Y

Loop 3

 

331

331: V, M or P

346: P, conserved

C-terminus

 

349

349: A, conserved

364: V, P, Q, L or A

C-terminus

Best3 vs Best4

 

in vertebrate Best3

in vertebrate Best4

 
 

60*

60: R, conserved

60: Y, H, R, S or D

Loop 1

 

115

115: H, Q, R or L

115: H, conserved

Loop 2

 

209*

209: S, T, M or N

209: L, conserved

Loop 2

 

264

264: Y, conserved

279: P, Q, S, L, E, G or Y

Loop 3

 

266

266: G, conserved

281: L, V, E, P, K, D or A

Loop 3

 

331

331: K or R

346: P, conserved

C-terminus

Best2 vs Best3

 

in vertebrate Best2

in vertebrate Best3

 
 

165*

165: R, conserved

165: T, A, P, S or R

Loop 2

 

268

268: D, T, S or N

268: D, conserved

Loop 3

 

333

333: E, conserved

333: K, R, E, A, N or T

C-terminus

 

354*

354: Q, L, D or V

354: Y, conserved

C-terminus, AI domain

 

365

366: D, conserved

365: Q, D, E or H

C-terminus, AI domain