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Table 2 GC3 of fugu paralog subcluster protocadherin sequences

From: Sequencing and comparative analysis of fugu protocadherin clusters reveal diversity of protocadherin genes among teleosts

Paralog subclusters

GC3 (%)

 

5' low homology regiona

3' high homology regiona

p Valueb

FrPcdh2α2–7

41.3 ± 7.2

61.2 ± 0.3

2.78 × 10-4

FrPcdh2α9–25

38.4 ± 4.3

54.4 ± 0.5

2.68 × 10-16

FrPcdh2α26–36

45.0 ± 2.2

60.7 ± 0.7

1.32 × 10-15

FrPcdh2γ1–17

43.6 ± 2.6

56.3 ± 0.4

2.40 × 10-19

FrPcdh2γ19–32'

41.5 ± 3.4

58.5 ± 0.6

3.28 × 10-15

FrPcdh2γ33'-36'

40.1 ± 1.2

68.8 ± 0.3

6.35 × 10-9

  1. a GC3 is calculated as the average percentage of the GC content at the codon third-position in each paralog subcluster and expressed as mean ± standard deviation.
  2. b The statistical analysis was conducted using Student's t-test.
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BMC Ecology and Evolution

ISSN: 2730-7182

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