Figure 3
From: Radiation of the Tnt1 retrotransposon superfamily in three Solanaceae genera
Phylogenetic analysis of Tnt1 Solanaceae superfamily. Phylogenetic analysis was performed with 197 sequences amplified from different species of Solanum (species are indicated by a code cited in Table 1 and different clones are indicated by numbers), and representative sequences from Tnt1 A, B and C, and Retrolyc1 A and B. The aligned nucleotide sequences span the last fragment of the RNAseH domain, the linker, U3, R and part of the U5 region.