Table 5 Description and origin of pP42F and pP89 haplotypes of Rhizoctonia solani AG-3 from potato and tobacco
Isolate | Origin (region and State) | Loci | |||||
|---|---|---|---|---|---|---|---|
pP42F | pP89 | ||||||
Haplotypes designation for phylogenetic analysis | Haplotype designation for coalescent analysis* | Sequence code at GenBank® NCBI | Haplotypes designation for phylogenetic analysis | Haplotype designation for coalescent analysis* | Sequence code at GenBan® NCBI | ||
Potato tubers | Northern US | Â | Â | Â | Â | Â | Â |
P006 | Maine | P0061 | A | AY458145.1 | P0061 | A | AY458184.1 |
| Â | Â | P0062 | A | AY458146.1 | P0062 | L | AY458185.1 |
P034 | Wisconsin | P0341 a/b | G | AY458147.1 | P0341 | L | AY458186.1 |
| Â | Â | - | - | - | P0342 | L | AY458187.1 |
P047 | Maine | P0471 | A | AY458148.1 | P0471 | K | AY458188.1 |
| Â | Â | P0472 | F | AY458149.1 | P0472 | G | AY458189.1 |
P083 | Wisconsin | P0831 | G | AY458150.1 | P08310 | L | AY458190.1 |
| Â | Â | P0832 | J | AY458151.1 | P08311 | L | AY458191.1 |
P084 | Wisconsin | P0841 | D | AY458152.1 | P0841 | H | AY458192.1 |
| Â | Â | P0842 | J | AY458153.1 | P0842 | B | AY458193.1 |
Potato stems | Eastern NC | Â | Â | Â | Â | Â | Â |
P102 | Washington | P1021 | A | AY458154.1 | P1021 | I | AY458194.1 |
| Â | Â | P1022 | K | AY458155.1 | P1022 | C | AY458195.1 |
P137 | Tyrrell | P1371 | A | AY458156.1 | P1371 | L | AY458196.1 |
| Â | Â | P1372 | D | AY458157.1 | P1372 | B | AY458197.1 |
P151 | Hyde | P1511 | K | AY458158.1 | P1511 | B | AY458198.1 |
| Â | Â | P1512 | H | AY458159.1 | P1512 | L | AY458199.1 |
P152 | Hyde | P1521 | J | AY458160.1 | P1522 | L | AY458200.1 |
| Â | Â | P1522 | K | AY458161.1 | P1523 | B | AY458201.1 |
P170 | Hyde | P1701 a/b | D | AY458162.1 | P1701 a/b | L | AY458202.1 |
P198 | Camdem | P1981 | I | AY458163.1 | P1984 | L | AY458203.1 |
| Â | Â | P1982 | A | AY458164.1 | P1986 | D | AY458204.1 |
P216 | Camdem | P2161 | J | AY458165.1 | P2161 | L | AY458205.1 |
| Â | Â | P2162 | E | AY458166.1 | P2162 | L | AY458206.1 |
P217 | Camdem | P2171 | J | AY458167.1 | P2171 | L | AY458207.1 |
| Â | Â | P2172 | E | AY458168.1 | P2172 | J | AY458208.1 |
Tobacco leaves | Central NC | Â | Â | Â | Â | Â | Â |
T025 | Lenoir | T0251 a/b | B | AY458169.1 | T0251 a/b | E | AY458209.1 |
T033 | Duplin | T0331 a/b | B | AY458170.1 | T0331 a/b | E | AY458210.1 |
T084 | Edgecombe | T0841 a/b | B | AY458171.1 | T0841 a/b | E | AY458211.1 |
T113 | Edgecombe | T1131 a/b | B | AY458172.1 | T1131 a/b | E | AY458212.1 |
T149 | Caswell | T1491 a/b | B | AY458173.1 | T1491 a/b | E | AY458213.1 |
T168 | Caswell | T1681 a/b | B | AY458174.1 | T1681 a/b | E | AY458214.1 |
| Â | Southern Brazil | Â | Â | Â | Â | Â | Â |
TBR17 | Parana and Santa Catarina States | TBR171 a/b | B | AY458175.1 | TBR171 a/b | E | AY458215.1 |
TBR19 | Â | TBR191 a/b | B | AY458176.1 | TBR191 a/b | E | AY458216.1 |
TBR20 | Â | TBR201 a/b | B | AY458177.1 | TBR201 a/b | E | AY458217.1 |
TBR21 | Â | TBR211 a/b | B | AY458178.1 | TBR211 a/b | E | AY458218.1 |
TBR22 | Â | TBR221 a/b | B | AY458179.1 | TBR221 a/b | E | AY458219.1 |
TBR23 | Â | TBR231 a/b | B | AY458180.1 | TBR231 a/b | E | AY458220.1 |
TBR24 | Â | TBR241 a/b | C | AY458181.1 | TBR241 a/b | F | AY458221.1 |
TBR27 | Â | TBR271 a/b | B | AY458182.1 | TBR271 a/b | E | AY458222.1 |
TBR28 | Â | TBR281 a/b | B | AY458183.1 | TBR281 a/b | E | AY458223.1 |