Table 2 Pairwise comparison of KCNA 3-2-10 clusters Above the diagonal are the numbers of shared cliques (clusters of phylogenetic footprints) based on Tracker analyses; below are the complete lengths of shared elements. Excluded direct comparisons between pufferfish clusters are printed in bold. "a" and "b" refer to the duplicated fish clusters.
From: Phylogenomic analyses of KCNA gene clusters in vertebrates: why do gene clusters stay intact?
3210 | Hs | Gg | Xt | Gaa | Ola | Tra | Tna | Trb | Tnb | Gab | Drb |
|---|---|---|---|---|---|---|---|---|---|---|---|
Hs | - | 28 | 24 | 5 | 6 | 5 | 5 | 8 | 6 | 13 | 10 |
Gg | 1788 | - | 16 | 9 | 7 | 3 | 6 | 8 | 4 | 6 | 6 |
Xt | 1375 | 1077 | - | 10 | 13 | 6 | 10 | 11 | 8 | 11 | 12 |
Gaa | 450 | 514 | 507 | - | 47 | 41 | 39 | 8 | 8 | 7 | 9 |
Ola | 445 | 462 | 618 | 4560 | - | 37 | 34 | 4 | 5 | 4 | 7 |
Tra | 484 | 282 | 395 | 4129 | 3599 | - | 33 | 3 | 6 | 4 | 5 |
Tna | 412 | 452 | 497 | 4270 | 3520 | 3052 | - | 6 | 8 | 9 | 6 |
Trb | 559 | 408 | 553 | 827 | 460 | 444 | 505 | - | 55 | 75 | 10 |
Tnb | 439 | 303 | 414 | 1005 | 586 | 703 | 741 | 4966 | - | 70 | 8 |
Gab | 730 | 370 | 550 | 803 | 460 | 493 | 647 | 5952 | 5527 | - | 8 |
Drb | 788 | 469 | 602 | 805 | 586 | 600 | 574 | 980 | 813 | 906 | - |