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Table 2 Genes of the island STM4305 region

From: A new experimental approach for studying bacterial genomic island evolution identifies island genes with bacterial host-specific expression patterns

 

STM

 

Common gene

 
 

number

 

name

Predicted gene function

 

STM4299

 

melB, mel-4

Sodium, melibiose permease II

 

STM4300

 

fumB

Fumarase B (fumarate hydratase class I)

 

STM4301

 

dcuB, genF

Dcu family, anaerobic C4-dicarboxylate transporter

 

STM4302

  

Putative cytoplasmic protein

 

STM4303

 

dcuR, yjdG

Response regulator in two-component system with DcuS

 

STM4304

 

dcuS, yjdH

Sensory histidine kinase in two-component system with DcuR

island genes

STM4305

 

dmsA

Putative anaerobic dimethyl sulfoxide reductase, subunit A

 

STM4306

 

dmsB

Putative anaerobic dimethyl sulfoxide reductase, subunit B

 

STM4307

 

dmsC

Putative anaerobic dimethyl sulfoxide reductase, subunit C

 

STM4308

  

Putative component of anaerobic dehydrogenases

 

STM4309

  

Putative periplasmic or exported protein

 

STM4310

  

Putative inner membrane protein

 

STM4311

 

tnpA

IS200 transposase

 

STM4312

  

Putative phage protein

 

STM4313

  

Putative cytoplasmic protein

 

STM4314

 

rtsB

Regulatory protein, LuxR family

 

STM4315

 

rtsA

Regulatory protein, AraC family

 

STM4316

  

Putative cytoplasmic protein

 

STM4317

  

Putative helix-turn-helix protein, CopG family

 

STM4318

  

Putative acetyltransferase

 

STM4319

 

phoN

Non-specific acid phoshpatase

 

STM4320

  

Putative regulatory protein, MerR family

 

STM4321

 

pheU tRNA

pheU tRNA

 

STM4322

 

yjdC, cutA3

Putative regulatory protein, MerR family

 

STM4323

 

dsbD, cutA2

Thiol-disulfide interchange protein

 

STM4324

 

cutA, cutA1

Putative periplasmic divalent cation tolerance protein

 

STM4325

 

dcuA, genA

Dcu family, anaerobic dicarboxylate transport protein