Gain penalty (g) | Number of genes (COGs) | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
 | .1 | .2 | .3 | .4 | .5 | .6 | .7 | .8 | .9 | 1 | 1.25 | 1.5 | 2 | 3 | 5 | 7 | 10 |
LUCA – genome tree | 84 | 98 | 109 | 132 | 212 | 214 | 266 | 285 | 310 | 572 | 623 | 733 | 956 | 1211 | 1525 | 1664 | 1725 |
LUCA – rRNA tree | 84 | 112 | 151 | 195 | 271 | 240 | 304 | 293 | 319 | 643 | 645 | 682 | 894 | 1123 | 1407 | 1564 | 1668 |
Archaeal Ancestor genome tree | 390 | 391 | 427 | 521 | 663 | 660 | 732 | 727 | 750 | 977 | 982 | 1046 | 1178 | 1295 | 1508 | 1619 | 1673 |
Archaeal Ancestor rRNA tree | 390 | 431 | 511 | 599 | 709 | 672 | 740 | 729 | 755 | 922 | 922 | 958 | 1086 | 1209 | 1417 | 1544 | 1636 |
Bacterial ancestor genome tree | 169 | 193 | 243 | 283 | 397 | 415 | 476 | 506 | 532 | 773 | 841 | 986 | 1259 | 1582 | 1879 | 2028 | 2091 |
Bacterial ancestor rRNA tree | 169 | 267 | 355 | 525 | 613 | 585 | 653 | 646 | 672 | 925 | 928 | 961 | 1162 | 1380 | 1653 | 1807 | 1933 |
HGT genome tree | 13241 | 13001 | 12315 | 11464 | 9462 | 9312 | 8733 | 8365 | 8315 | 5495 | 5136 | 4238 | 2646 | 1295 | 368 | 97 | 13 |
HGT rRNA tree | 15145 | 14161 | 12949 | 11074 | 9133 | 9007 | 8416 | 8158 | 8146 | 5040 | 4961 | 4253 | 2654 | 1529 | 546 | 224 | 51 |
Loss genome tree | 0 | 45 | 220 | 512 | 1506 | 1595 | 1989 | 2259 | 2301 | 5121 | 5562 | 6872 | 9944 | 13695 | 17535 | 19230 | 19947 |
Loss rRNA tree | 0 | 172 | 478 | 1135 | 2100 | 2175 | 2567 | 2763 | 2773 | 5879 | 5977 | 6997 | 10137 | 13301 | 17489 | 19539 | 21050 |
Total events genome tree | 16407 | 16212 | 15701 | 15142 | 14134 | 14073 | 13878 | 13790 | 13782 | 13782 | 13864 | 14276 | 15756 | 18156 | 21069 | 22493 | 23126 |
Total events rRNA tree | 18311 | 17499 | 16593 | 15375 | 14399 | 14348 | 14149 | 14087 | 14085 | 14085 | 14104 | 14416 | 15957 | 17996 | 21201 | 22929 | 24267 |
Single scenarios genome tree | 3166 | 3091 | 3163 | 3075 | 2496 | 3150 | 3166 | 3159 | 3166 | 1613 | 3150 | 2958 | 2246 | 2600 | 2907 | 3048 | 3122 |
Single scenarios rRNA tree | 3166 | 3139 | 3164 | 3147 | 2494 | 3144 | 3166 | 3152 | 3166 | 1806 | 3108 | 2894 | 2399 | 2587 | 2982 | 3081 | 3154 |