Cnidarian phylogenetic hypothesis based on mitochondrial protein genes. Phylogenetic analyses of cnidarian protein coding genes under the CATGTR model with PhyloBayes for the AliMG alignment (3111 positions, 106 taxa) created using the MUSCLE plug-in in Geneious and filtered using Gblock. Support values correspond to the posterior probabilities for the CATGTR(BI) and GTR(BI), and bootstraps for GTR(ML) analyses. Stars denote maximum support values. A dash denotes discrepancy between the results obtained when assuming different models.