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Table 2 Sperm Adam site selection for expanded species groups showing clade localization of selective bouts

From: Positive selection in the adhesion domain of Mus sperm Adam genes through gene duplications and function-driven gene complex formations

Gene Group n p1; ω (M8) 2Δℓ (M8-M8a) BEB sites (P > 95%) TreeSAAP sites (BEB)
Adam1a Glires 9   1.51   
Adam1b Glires 9 0.24; 1.93 4.56 2 30 (2)
Adam1 Glires 18 0.16; 2.05 10.89 4 59 (4)
  Laurasiatheria 6   2.44   
Adam2 Glires 9 0.02; 21.73 11.34 2 38 (2)
  Laurasiatheria 7 0.33; 2.54 22.71 16 55 (15)
Adam3 Glires 9 0.03; 8.44 5.07 1 27 (1)
  Laurasiatheria 8 0.13; 2.64 10.05 1 48 (1)
Adam4 Glires 12 0.31; 3.98 24.71 11 20 (9)
  Laurasiatheria 2 Not Run    
Adam5 Glires 8 0.05; 21.51 23.32 4 20 (3)
  Laurasiatheria 8 0.16; 3.55 24.09 9 37 (9)
Adam6 Glires 13   0.6   
  Laurasiatheria 3 Not Run    
  1. n, 2Δℓ, ω, and p1 are utilized as in Table 1. BEB Sites are the number of sites identified as being under positive selection using model M8 in PAML and a posterior probability threshold higher than 95%. TreeSAAP Sites are the number of positively selected sites as identified by TreeSAAP with the number of sites shared with PAML in brackets. Significance of the 2Δℓ test statistics is depicted as in Table 1.