|
Length (bp)
|
N
|
A
|
PIP/VNP
|
R
|
K2P distance (%)
|
AA distance (%)
|
d
N
|
d
S
|
dN/dS
|
---|
DRA
|
243
|
33
|
22
|
9/15
|
4.75
|
1.3(0.4)
|
1.7 (0.7)
|
0.008 (0.003)
|
0.025 (0.011)
|
0.32
|
DQA
|
201
|
55
|
48*
|
70/96
|
1.34
|
13.7(2.2)
|
21.6 (4.4)
|
0.105 (0.019)
|
0.106 (0.021)
|
0.99
|
- Length = number of base pairs (bp); N = number of alleles when considering identical alleles across taxa separately; A = number of alleles across taxa; PIP = parsimony informative positions; VNP = variable nucleotide positions; R = transition/transversion bias; K2P distance = average mean evolutionary distance determined using the Kimura 2-parameter gamma model (K2P+Γ); AA = average mean poisson-corrected amino acid distance; dS = synonymous base pair substitution rate; dN = non-synonymous base pair substitution rate; Standard errors of estimates are shown in parentheses. *Includes the allele Eqbu-DQA*21, with a stop codon, while all other estimates exclude it.