| Â | Length (bp) |
N
|
A
| PIP/VNP | R | K2P distance (%) | AA distance (%) |
d
N
|
d
S
| dN/dS |
|---|
DRA
| 243 | 33 | 22 | 9/15 | 4.75 | 1.3(0.4) | 1.7 (0.7) | 0.008 (0.003) | 0.025 (0.011) | 0.32 |
DQA
| 201 | 55 | 48* | 70/96 | 1.34 | 13.7(2.2) | 21.6 (4.4) | 0.105 (0.019) | 0.106 (0.021) | 0.99 |
- Length = number of base pairs (bp); N = number of alleles when considering identical alleles across taxa separately; A = number of alleles across taxa; PIP = parsimony informative positions; VNP = variable nucleotide positions; R = transition/transversion bias; K2P distance = average mean evolutionary distance determined using the Kimura 2-parameter gamma model (K2P+Γ); AA = average mean poisson-corrected amino acid distance; dS = synonymous base pair substitution rate; dN = non-synonymous base pair substitution rate; Standard errors of estimates are shown in parentheses. *Includes the allele Eqbu-DQA*21, with a stop codon, while all other estimates exclude it.
