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Table 5 Polymorphism statistics for 8 candidate cis-regulatory regions in 18 Lake Malawi cichlid species

From: Divergence in cis-regulatory sequences surrounding the opsin gene arrays of African cichlid fishes

Opsin Length (bp) S 1 s2 H3 π4 C5 T D 6 CRX7
SWS1 1000 16 5 17 0.0020 0.983 -1.4424 1
SWS2B 694 2 1 3 0.0008 0.997 0.2951 0
SWS2A 1000 7 1 6 0.0010 0.992 -1.1518 2
RH2B 950 17 3 15 0.0022 0.982 -1.1050 2
LWS 956 12 2 11 0.0012 0.987 -1.2394 0
CNE 10 882 12 1 10 0.0021 0.986 -0.2311 0
SWS2B UTR 442 2 0 4 0.0013 0.995 0.4486 NA
LWS UTR* 436 1 0 2 0.0006 0.998 0.0298 NA
  1. 1 Total number of segregating sites
  2. 2 Total number of segregating sites that are singletons
  3. 3 Total number of haplotypes
  4. 4 Nucleotide diversity
  5. 5 Sequence conservation
  6. 6 Tajima's D
  7. 7 Total number of segregating sites that interrupt predicted CRX binding sites
  8. * Statistics presented for in/del polymorphism