Table 3 Names, taxonomic classifications and GenBank accession numbers of the species used in our phylogenetic analyses (asterisks point to partial genome data; percental coverage in the final alignment is indicated for these taxa).
Species | Systematic position | GenBank accession number |
|---|---|---|
Symsagittifera roscoffensis | Acoela | [GenBank: HM237350] |
Paratomella rubra*(69%) | Acoela | [GenBank: AY228758] |
Nemertoderma westbladii*(35%) | Nemertodermatida | [GenBank: AY228757] |
Urechis caupo | Echiura | [GenBank: NC_006379] |
Myzostoma seymourcollegiorum*(80%) | Myzostomida | [GenBank: EF506562] |
Lumbricus terrestris | Annelida - Clitellata | [GenBank: NC_001677] |
Platynereis dumerilii | Annelida - "Polychaeta" | [GenBank: NC_000931] |
Microstomum lineare*(49%) | Platyhelminthes - Turbellaria | [GenBank: AY228756] |
Trichobillharzia regenti | Platyhelminthes - Trematoda | [GenBank: NC_009680] |
Fasciola hepatica | Platyhelminthes - Trematoda | [GenBank: NC_002546] |
Microcotyle sebastis | Platyhelminthes - Monogenea | [GenBank: NC_009055] |
Gyrodactylus salaris | Platyhelminthes - Monogenea | [GenBank: NC_008815] |
Diphyllobothrium latum | Platyhelminthes - Cestoda | [GenBank: NC_008945] |
Hymenolepis diminuta | Platyhelminthes - Cestoda | [GenBank: NC_002767] |
Trichinella spiralis | Nematoda | [GenBank: NC_002681] |
Xiphinema americanum | Nematoda | [GenBank: NC_005928] |
Caenorhabditis elegans | Nematoda | [GenBank: NC_001328] |
Brachionus plicatilis (part 1) | Rotifera | [GenBank: NC_010472] |
Brachionus plicatilis (part 2) | Rotifera | [GenBank:NC_010484] |
Leptorhynchoides thecatus | Acanthocephala | [GenBank: NC_006892] |
Epiperipatus biolleyi | Onychophora | [GenBank: NC_009082] |
Limulus polyphemus | Chelicerata - Xiphosura | [GenBank: NC_003057] |
Lithobius forficatus | Myriapoda - Chilopoda | [GenBank: NC_002629] |
Drosophila yakuba | Hexapoda - Pterygota | [GenBank: NC_001322] |
Triops cancriformis | Crustacea - Phyllopoda | [GenBank: NC_004465] |
Squilla mantis | Crustacea - Malacostraca | [GenBank: NC_006081] |
Priapulus caudatus | Priapulida | [GenBank: NC_008557] |
Lineus viridis | Nemertea | [GenBank: NC_012889] |
Phoronis psammophila*(98%) | Phoronida | [GenBank: AY368231] |
Terebratulina retusa | Brachiopoda | [GenBank: NC_000941] |
Laqueus rubellus | Brachiopoda | [GenBank: NC_002322] |
Katharina tunicate | Mollusca - Polyplacophora | [GenBank: NC_001636] |
Haliotis rubra | Mollusca - Gastropoda | [GenBank: NC_005940] |
Octopus ocellatus | Mollusca - Cephalopoda | [GenBank: NC_007896] |
Loxosomella aloxiata | Entoprocta | [GenBank: NC_010432] |
Flustrellidra hispida | Bryozoa/Ectoprocta | [GenBank: NC_008192] |
Bugula neritina | Bryozoa/Entoprocta | [GenBank: NC_010197] |
Paraspadella gotoi | Chaetognatha | [GenBank: NC_006083] |
Spadella cephaloptera | Chaetognatha | [GenBank: NC_006386] |
Balanoglossus carnosus | Hemichordata | [GenBank: NC_001887] |
Branchiostoma floridae | Chordata - Cephalochordata | [GenBank: NC_000834] |
Myxine glutinosa | Chordata - Craniata | [GenBank: NC_002639] |
Florometra serratissima | Echinodermata - Crinoidea | [GenBank: NC_001878] |
Asterias amurensis | Echinodermata - Asteroidea | [GenBank: NC_006665] |
Cucumaria miniata | Echinodermata - Holothuroidea | [GenBank: NC_005929] |
Xenoturbella bocki | Xenoturbellida | [GenBank: NC_008556] |
Oscarella carmela | Porifera - Demospongia | [GenBank: NC_009090] |
Geodia neptuni | Porifera - Demospongia | [GenBank: NC_006990] |
Acropora tenuis | Cnidaria - Anthozoa | [GenBank: NC_003522] |
Aurelia aurita | Cnidaria - Scyphozoa | [GenBank: NC_008446] |
Trichoplax adhaerens | Placozoa | [GenBank: NC_008151] |