Distinct patterns of mitochondrial genome diversity in bonobos (Pan paniscus) and humans

Table 1 Homoplasies in bonobos

	Bonobo homoplasy	Human frequency (N = 4902)	Stability in humans	Neighborhood difference (± 5 nt)
•	51C	1	private
	151G	0	151C/T homoplasy	146C
	152C^a	1347
	153G	234
	194T	115
○	196C	10
	198T	133
	204C	309
	ins309C^b	1945
•	341G	1	private	338T, 339T
	ins/del965C	49		961C
○	1809C	5		1811C
•	5573G	0	not present
•	5910A	1	private
•	6089G	0	not present	6092C
○	8227C	5
	12127A	28		12124T, 12130C, 12131A
○	13488C	2
○	14831A	10		14827T
•	16142T	6	single group	16138T
•	ins16170T	0	not present
	16217C	192		16213A
	16249C	165		16244A
	16278T^a	638		16273C
	16294T^a	415		16289G, 16290A, 16292A
	16295T	56		16290A, 16292A
	16311C^a	1030
	16362C^a	1231
	16391A	41
	16524G	26		16528T, 16529C
•	16559G	0	not present

^aSite classified as human homoplasy or ^bhypervariable by Finnilä et al. [25]. Filled dots indicate bonobo-specific homoplasies (in case of positions marked by empty circles, the classification of human polymorphic positions as non-homoplasic was less conservative).

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