Evolution of the CD163 family and its relationship to the bovine gamma delta T cell co-receptor WC1

Herzig, Carolyn TA; Waters, Ray W; Baldwin, Cynthia L; Telfer, Janice C

doi:10.1186/1471-2148-10-181

BMC Ecology and Evolution

Table 3 Estimates of evolutionary divergence between bovine archetypal WC1.1, bovine CD163A and bovine CD163c-α SRCR domains

From: Evolution of the CD163 family and its relationship to the bovine gamma delta T cell co-receptor WC1

			BtWC1.1
	SRCR domain		a	b	c	d	e	d'
			1	2, 7	3, 8	4, 6, 9	5, 10	11
BtCD163A	h	1	0.551 (0.056)	0.667, 0.654 (0.053, 0.054)	0.641, 0.654 (0.054, 0.054)	0.462, 0.462, 0.500 (0.056, 0.056, 0.057)	0.705, 0.692 (0.052, 0.052)	0.500 (0.057)
	i	2	0.526 (0.057)	0.577, 0.564 (0.056, 0.056)	0.590, 0.615 (0.056, 0.055)	0.436, 0.410, 0.436 (0.056, 0.056, 0.056)	0.705, 0.667 (0.052, 0.053)	0.487 (0.057)
	j	3	0.500 (0.057)	0.679, 0.654 (0.053, 0.054)	0.654, 0.679 (0.054, 0.053)	0.449, 0.449, 0.449 (0.056, 0.056, 0.056)	0.705, 0.705 (0.052, 0.052)	0.500 (0.057)
	k	4	0.564 (0.056)	0.654, 0.641 (0.054, 0.054)	0.615, 0.615 (0.055, 0.055)	0.564, 0.551, 0.577 (0.056, 0.056, 0.056)	0.705, 0.692 (0.052, 0.052)	0.500 (0.057)
	b	5	0.551 (0.056)	0.449, 0.436 (0.056, 0.056)	0.577, 0.603 (0.056, 0.055)	0.526, 0.590, 0.513 (0.057, 0.056, 0.054)	0.718, 0.692 (0.051, 0.052)	0.538 (0.056)
	c	6	0.590 (0.056)	0.615, 0.590 (0.055, 0.056)	0.513, 0.538 (0.057, 0.056)	0.513, 0.590, 0.526 (0.057, 0.056, 0.057)	0.769, 0.731 (0.048, 0.050)	0.603 (0.055)
	d	7	0.487 (0.057)	0.641, 0.628 (0.054, 0.055)	0.590, 0.603 (0.056, 0.055)	0.218, 0.321, 0.218 (0.047, 0.053, 0.047)	0.667, 0.641 (0.053, 0.054)	0.474 (0.057)
	e	8	0.744 (0.049)	0.731, 0.705 (0.050, 0.052)	0.731, 0.731 (0.050, 0.050)	0.718, 0.744, 0.692 (0.051, 0.049, 0.052)	0.513, 0.500 (0.057, 0.057)	0.692 (0.052)
	d'	9	0.526 (0.057)	0.615, 0.590 (0.055, 0.056)	0.590, 0.590 (0.056, 0.056)	0.423, 0.436, 0.397 (0.056, 0.056, 0.055)	0.679, 0.667 (0.053, 0.053)	0.359 (0.054)
BtCD163c-α	m	1	0.654 (0.054)	0.756, 0.731 (0.049. 0.050)	0.679, 0.679 (0.053, 0.053)	0.654, 0.667, 0.654 (0.054, 0.053, 0.054)	0.795, 0.769 (0.046, 0.048)	0.628 (0.055)
	l	2	0.718 (0.051)	0.692, 0.705 (0.052, 0.052)	0.705, 0.718 (0.052, 0.051)	0.654, 0.654, 0.667 (0.054, 0.054, 0.053)	0.769, 0.795 (0.048, 0.046)	0.679 (0.053)
	b	3	0.551 (0.056)	0.538, 0.526 (0.056, 0.057)	0.577, 0.577 (0.056, 0.056)	0.513, 0.577, 0.526 (0.057, 0.056, 0.057)	0.718, 0.692 (0.051, 0.052)	0.526 (0.057)
	c	4	0.603 (0.055)	0.628, 0.615 (0.055, 0.055)	0.526, 0.538 (0.057, 0.056)	0.603, 0.615, 0.603 (0.055, 0.055, 0.055)	0.744, 0.744 (0.049, 0.049)	0.615 (0.055)
	n	5	0.513 (0.057)	0.679, 0.667 (0.053, 0.053)	0.654, 0.654 (0.054, 0.054)	0.564, 0.590, 0.564 (0.056, 0.056, 0.056)	0.744, 0.756 (0.049, 0.049)	0.564 (0.056)
	d	6	0.500 (0.057)	0.577, 0.564 (0.056, 0.056)	0.577, 0.590 (0.056, 0.056)	0.346, 0.423, 0.333 (0.054, 0.056, 0.053)	0.679, 0.667 (0.053, 0.053)	0.487 (0.057)
	e	7	0.705 (0.052)	0.667, 0.679 (0.056, 0.056)	0.692, 0.718 (0.052, 0.051)	0.628, 0.641, 0.628 (0.055, 0.054, 0.055)	0.526, 0.526 (0.057, 0.057)	0.615 (0.055)
	d'	8	0.526 (0.057)	0.577, 0.577 (0.053, 0.053)	0.615, 0.615 (0.055, 0.055)	0.436, 0.423, 0.397 (0.056, 0.056, 0.055)	0.615, 0.615 (0.055, 0.055)	0.321 (0.053)

Analyses were conducted as described in Table 1.

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