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Table 1 Overview of the high-throughput read analysis, including total OTUs and diversity statistics

From: The characteristics of the intestinal bacterial community from Oreochromis mossambicus and its interaction with microbiota from artificial fishery habitats

Groups

Intestines

Water

Sediment

AI

CI

AW

CW

AS

CS

Total OTUs (97%)

830 ± 33 a

615 ± 21 b

913 ± 56 c

969 ± 49 c

1130 ± 101 c

1239 ± 99 d

Diversity indices

      

 Shannon

5.52 ± 0.27 a

4.34 ± 0.14 b

7.15 ± 0.48 c

7.22 ± 0.26 c

6.61 ± 0.08 c

6.93 ± 0.14 c

 Simpson

0.0366 ± 0.0021 a

0.1573 ± 0.0018 b

0.0186 ± 0.0003 c

0.0147 ± 0.0005 c

0.0428 ± 0.0058 a

0.0125 ± 0.0043 d

 Chao-1

855 ± 124 a

794 ± 96 a

932 ± 36 b

991 ± 59 b

1266 ± 106 c

1359 ± 218 c

 Coverage

0.99 ± 0.01

0.99 ± 0.01

0.99 ± 0.01

0.99 ± 0.01

0.99 ± 0.01

0.99 ± 0.01

  1. The OTUs and the bacterial community diversity analysis of all samples from intestines (I), water (W), and sediment (S) in artificial habitats (AI, AW, and AS) and control areas (CI, CW, and CS) are shown. The means ± SD data of Table 1 in the same row with different letters differ significantly (P < 0.05)