Table 1 List of Species-data used for different analyses
Major lineage | Species | Acc. Number | Mt- group II introns | |
|---|---|---|---|---|
Streptophyte algae | Coleochaetophyceae | Chaetosphaeridium globosum | NC_004118.1 | 2 + |
Coleochaetophyceae | Coleochaete scutata | NC_045180.1 | 26 + | |
Mesostigmatophyceae | Mesostigma viride | AF353999 | 3 | |
Chlorokybophyceae | Chlorokybus atmophyticus | EF463011.1 | 14 + | |
Charophyceae | Nitella hyalina | NC_017598 | 8 | |
Charophyceae | Chara vulgaris | NC_005255.1 | 13 + | |
Klebsormidiophyceae | Klebsormidium flaccidum | KP165386 | 4 | |
Zygnematophyceae | Closterium baillyanum | NC_022860.1 | 12 + | |
Zygnematophyceae | Roya obtusa | NC_22863.1 | 2 | |
Zygnematophyceae | Entransia fimbriata | NC_22861.1 | 2 | |
Zygnematophyceae | Zygnema circumcarinatum | MT040698.1 | 10 + | |
Zygnematophyceae | Gonatozygon brebissonii | NC_046951.1 | 6 | |
Liverworts | Haplomitriopsida | Treubia lacunosa | NC_016122.1 | 21 + |
Marchantiopsida | Marchantia polymorpha | MK202951.1 | 25 + | |
Jungermanniopsida | Calypogeia fissa | NC_035980 | 19 + | |
Jungermanniopsida | Pleurozia purpurea | NC_013444 | 22 | |
Mosses | Sphagnopsida | Flatbergium novo-caledoniae* | KU725492 | 26 + |
Sphagnopsida | Sphagnum palustre | NC_024521.1 | 26 + | |
Bryopsida | Physcomitrium patens | NC_007945.1 | 24 + | |
Bryopsida | Anomodon rugelii | NC_016121 | 24 | |
Bryopsida | Ulota crispa | NC_031393 | 24 | |
Hornworts | Leiosporocerotopsida | Leiosporoceros dussii | NC_039751.1 | 34 + |
Anthocerotopsida | Anthoceros agrestis | NC_049004.1 | 39 + | |
Anthocerotopsida | Nothoceros aenigmaticus | EU660574 | 28 + | |
Anthocerotopsida | Phaeoceros laevis | NC_013765 | 31 | |
Lycophytes | Lycopodiopsida | Phlegmariurus squarrosus | NC_017755.1 | 37 + |
Lycopodiopsida | Isoetes engelmannii | FJ390841.1, FJ176330.1, FJ010859.1, FJ628360.1 | 23 | |
Lycopodiopsida | Selaginella moellendorffii | JF338143.1–JF338147.1 | 33 | |
Ferns (Monilophytes) | Polypodiopsida | Ophioglossum californicum | NC_030900.1 | 20 |
Polypodiopsida | Psilotum nudum | NC_030952 & KX171639.1 | 24 + | |
Polypodiopsida | Haplopteris ensiformis | OM867545- OM867553 | 24 + | |
Gymnosperms | Ginkgoopsida | Ginkgo biloba | NC_027976.1 | 25 + |
Cycadopsida | Cycas taitungensis | NC_010303 | 25 + | |
Gnetopsida | Welwitschia mirabilis | NC_029130 | 10 | |
Angisoperms | Magnoliopsida | Amborella trichopoda | KF754799-KF754803 | 24 |
Magnoliopsida | Nelumbo nucifera | NC_030753 | 23 + | |
Magnoliopsida | Zea mays | NC_007982.1 | 22 + | |
Magnoliopsida | Arabidopsis thaliana | NC_037304.1 | 23 + |