Table 2 Rapidly evolving gene families in the genomes of the boxwood blight pathogens Calonectria henricotiae (Che) and C. pseudonaviculata (Cps) that contain predicted proteins with pathogen host interactions (PHI) annotations and/or putative secreted effectors
Gene family ID | Rapidly evolving in Cps | Rapidly evolving in Che | COG category | Top Pfam target | Contains PHI annotated sequences | Contains putative secreted effectors |
|---|---|---|---|---|---|---|
OG0000000 | Â | (C) | S | NACHT (PF05729.13) | Yes | No |
OG0000003 | (C) | Â | O | CHAT (PF12770.8) | Yes | No |
OG0000008 | Â | (C) | U | Sugar transporter (PF00083.25) | Yes | No |
OG0000012 | (C) | Â | Z | Phosphorylase superfamily (PF01048.21) | No | Yes |
OG0000013 | Â | (C) | S | NACHT (PF05729.13) | Yes | No |
OG0000029 | (C) | Â | Q | Short-chain dehydrogenase (PF00106.26) | Yes | No |
OG0000036 | (C) | Â | G | Glycoside hydrolase family 18 (PF00704.29) | Yes | Yes |
OG0000041 | Â | (C) | G | Carboxylesterase family (PF00135.29) | Yes | No |
OG0000049 | (C) | Â | D | Protein kinase domain (PF00069.26) | Yes | No |
OG0000069 | Â | (C) | U | Trichothecene efflux pump (PF06609.14) | Yes | No |
OG0000091 | (C) | Â | G | LysM domain (PF01476.21) | Yes | Yes |
OG0000157 | Â | (C) | Q | Amine oxidase (PF01179.21) | Yes | No |
OG0000187 | Â | (C) | U | Sugar transporter (PF00083.25) | Yes | No |
OG0000321 | Â | (E) | Q | AMP-binding enzyme (PF00501.29) | Yes | No |
OG0000702 | (C) | Â | E | Aminotransferase class III (PF00202.22) | Yes | No |
OG0000852 | Â | (C) | S | Major facilitator family (PF07690.17) | Yes | No |
OG0001175 | (E) | Â | K | Fungal specific transcription factor domain (PF04082.19) | Yes | No |
OG0001226 | (E) | Â | IQ | AMP-binding enzyme (PF00501.29) | Yes | No |