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Table 1 Overview of libraries and samples

From: A novel distribution of supergene genotypes is present in the socially polymorphic ant Formica neoclara

Library year

# F. neoclara samples and # of total samples in the library

Sequencing facility

Sequence information

Average mean depth per individual, after filtering (range)

2016

75 of 1368

UC Berkeley Genomics Core

100 bp single-end reads, Illumina HiSeq 4000

123.0× (range 13–162.7)

2017

125 of 2629

UC Berkeley Genomics Core

150 bp paired-end reads, Illumina HiSeq 4000

68.1× (range 13.3–153.4)

2019

80 of 2348

Novogene

150 bp paired-end reads, Illumina HiSeq X 10

66.4× (range 13.8–134.1)