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Table 2 Ranking of reference genes in anterior and posterior scales across all of the haplochromine species used in this study

From: Expression variations in ectodysplasin-A gene (eda) may contribute to morphological divergence of scales in haplochromine cichlids

 

Anterior scales

Posterior scales

 

BestKeeper

geNorm

NormFinder

BestKeeper

geNorm

NormFinder

 

Ranks

SD

Ranks

M

Ranks

SV

Ranks

SD

Ranks

M

Ranks

SV

1

actb1

0.398

actb1

1.110

actb1

0.478

actb1

0.421

actb1

1.133

actb1

0.435

2

rps11

0.532

rps11

1.168

rps11

0.589

rps11

0.571

rps11

1.174

rps11

0.471

3

rps18

0.745

tbp

1.256

tbp

0.669

tbp

0.804

tbp

1.276

tbp

0.705

4

tbp

0.766

hsp90a

1.379

rps18

0.708

hsp90a

0.829

hsp90a

1.346

hsp90a

0.763

5

gapdh

0.869

rps18

1.396

hprt1

0.871

rps18

0.869

rps18

1.536

rps18

0.812

6

hsp90a

0.882

hprt1

1.590

hsp90a

0.879

gapdh

1.003

gapdh

1.703

hprt1

0.918

7

hprt1

0.929

gapdh

1.631

gapdh

1.227

hprt1

1.089

hprt1

1.729

gapdh

1.215

8

elf1a

1.507

elf1a

1.827

elf1a

1.420

elf1a

1.362

elf1a

1.754

elf1a

1.310

  1. SD indicates a ranking calculation based on standard deviation generated by BestKeeper, whereas SV stability value, and M mean expression stability value, are calculated by geNorm and NormFinder, respectively
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BMC Ecology and Evolution

ISSN: 2730-7182

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