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Fig. 2 | BMC Ecology and Evolution

Fig. 2

From: Relative model selection of evolutionary substitution models can be sensitive to multiple sequence alignment uncertainty

Fig. 2

RMS with AIC on unstable datasets. Corresponding figures for model selection with BIC and AICc are in Additional file 1: Fig. S1). a Barplot of the total number of unique selected models across the 50 variant MSAs generated for each dataset. Percentages of unstable datasets are shown separately for each dataset source (Drosophila, Euteleostomi, PANDIT) and datatype (AA and NT). b Histogram of the percentage of MSA variants whose selected model matched \(M_0\) (as determined by the respective information theoretic criterion), the most commonly selected model among all 50 MSA variants (TableĀ 1)

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