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Table 2 The number of exon, amino acids, and the synteny similarity

From: Evolution of hes gene family in vertebrates: the hes5 cluster genes have specifically increased in frogs

 

The number of exons

The number of amino acids

Synteny similar to

Human hes5

2

166aa

hes5.1

Mouse hes5

2

X1 167aa, X2 141aa

hes5.1

Chicken hes5 chr21-1

5

161aa

hes5.1

Chicken hes5 chr21-2

3

197aa

hes5.1

Chicken hes5 chr21-3

3

157aa

hes5.1

Gekko japonicus hes5 sc135-1

2

161aa

hes5.1

Gekko japonicus hes5 sc135-2

3

157aa

hes5.1

Xenopus tropicalis hes5.1

3

154aa

hes5.1

Xenopus laevis hes5.1L

3

154aa

hes5.1

Xenopus laevis hes5.1S

3

154aa

hes5.1

Xenopus tropicalis hes5.2

3

158aa

hes5.1

Xenopus laevis hes5.2L

3

158aa

hes5.1

Xenopus laevis hes5.2S

3

159aa

hes5.1

Xenopus tropicalis hes5.3

3

160aa

hes5.3

Xenopus laevis hes5.3L

3

183aa

hes5.3

Xenopus laevis hes5.3S

3

164aa

hes5.3

Xenopus tropicalis hes5.4

3

159aa

hes5.3

Xenopus laevis hes5.4L

3

159aa

hes5.3

Xenopus laevis hes5.4S

3

159aa

hes5.3

Xenopus tropicalis hes5.5

3

158aa

hes5.3

Xenopus tropicalis hes5.5

3

158aa

hes5.3

Xenopus laevis hes5.5L

3

158aa

hes5.3

Xenopus laevis hes5.5S

3

150aa

hes5.3

Xenopus tropicalis hes5.6

3

148aa

hes5.3

Xenopus laevis hes5.6L

3

156aa

hes5.3

Xenopus laevis hes5.6S

3

156aa

hes5.3

Xenopus laevis hes5.7L

3

154aa

hes5.3

Xenopus laevis hes5.7S

3

X1 155aa, X2 154aa

hes5.3

Xenopus tropicalis hes5.8

4

X1 145aa. X2 141aa

hes5.3

Xenopus laevis hes5.8L

3

140aa

hes5.3

Xenopus laevis hes5.8S

3

149aa

hes5.3

Xenopus tropicalis hes5.9

3

155aa

hes5.3

Xenopus laevis hes5.9L

3

155aa

hes5.3

Xenopus laevis hes5.9S

3

155aa

hes5.3

Xenopus tropicalis hes5.10

3

166aa

hes5.3

Xenopus laevis hes5.10L

3

144aa

hes5.3

Xenopus laevis hes5.10S

3

166aa

hes5.3

coelacanth hes5 sc00319

3

164aa

hes5.1

coelacanth hes5 sc00199

2

135aa

hes5.3

coelacanth hes5 sc00059

2

146aa

shark Sc221,

Xenopus chromosome1

coelacanth hes5 sc00001

3

190aa

Xenopus chromosome 7

zebrafish her4.1

2

152aa

hes5.1?

zebrafish her4.2 ENSDARP00000141050

2

152aa

hes5.1?

zebrafish her4.3

2

152aa

hes5.1?

zebrafish her4.4

2

152aa

hes5.1?

zebrafish her4.2 ENSDARP00000094981

2

152aa

hes5.1?

zebrafish her12

2

155aa

hes5.1?

zebrafish her2

2

108aa

hes5.3?

zebrafish her15.1

2

149aa

hes5.3?

zebrafish her15.2

2

149aa

hes5.3?

medaka her4.2

2

166aa

hes5.1? hes5.3?

medaka her12

2

145aa

hes5.1? hes5.3?

spotted gar hes5 LG25-1

2

163aa

hes5.1

spotted gar hes5 LG25-2

3

159aa

hes5.1

spotted gar hes5 LG25-3

2

159aa

hes5.1

spotted gar hes5 LG25-4

2

162aa

hes5.1

elephant shark hes5 Sc58-1

3

169aa

hes5 3

elephant shark hes5 Sc58-2

3

169aa

hes5.3

elephant shark hes5 Sc58-3

3

169aa

hes5.3

elephant shark hes5 Sc221

8

475aa

coelacanth hes5 sc00059, Xenopus chromosome 1

  1. The gene names in the vertical direction. X1 or X2 means the variants