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Table 7 Percentage of DEGs in evolved strains showing genetic interactions (GI) with the COG7, NUP133 or MSH2 gene

From: Genetic interaction network has a very limited impact on the evolutionary trajectories in continuous culture-grown populations of yeast

Evolved strain DEGs exhibiting genetic interactions with (%)
COG7 NUP133 MSH2
In accordance with functional module logic
cog7Δ 3.3 2.6 0.8
nup133Δ 0.0 4.4 0.5
wild-type 1.2 2.5 0.6
cog7Δ msh2Δ 0.0 1.5 0.3
nup133Δ msh2Δ 1.4 0.0 0.5
msh2Δ 0.6 4,0 1.2
No. of genes exhibiting GIs with deleted gene 175 204 62
  1. Results of analysis based on Costanzo et al. [16] data when stringent confidence filtration threshold (P < 0.05 and GIS > 0.16 or < − 0.12) was applied