Table 6 QTL mapping of metabolic traits
Trait | N | Covariate | LOD 5% | LOD 10% | LOD peak | PVE | Peak marker LG position | Scaffold | bp position |
|---|---|---|---|---|---|---|---|---|---|
Blood glucose start | 108 | None | 4.22 | 3.81 | 7.16 | 26.31 | r18170 9 150.9 | KB871607 | 839,363 |
Blood glucose end | 196 | None | 3.92 | 3.61 | 5.85 | 12.84 | r110832 9 151.8 | KB872022 | 216,703 |
Weight start | 219 | add_int | 7.35 | 6.59 | 4.03 | 8.13 | r197874 19 36 | KB882103 | 5,600,729 |
Weight start | 219 | Int | 7.35 | 6.59 | 5.86 | 11.59 | r230947 13 151 | KB882132 | 1,682,036 |
Weight 4Â month | 210 | add_int | 7.00 | 6.55 | 4.01 | 8.42 | r91812 19 64.3 | KB871887 | 492,183 |
Weight 4Â month | 210 | Int | 7.00 | 6.55 | 5.46 | 11.28 | r230947 13 151.0 | KB882132 | 1,682,036 |
Length start | 216 | add_int | 5.93 | 5.41 | 5.03 | 10.17 | r231495 13 144 | KB882132 | 577,777 |
Length start | 216 | Int | 5.93 | 5.41 | 5.22 | 10.53 | r91812 19 64.3 | KB871887 | 492,183 |
Length start | 216 | sex_int | 2.77 | 2.37 | 3.63 | 7.45 | r113255 25 90.7 | KB872047 | 277,233 |
Length end | 199 | add_int | 5.75 | 5.27 | 4.35 | 9.58 | r197874 19 36 | KB882103 | 5,600,729 |
Length end | 199 | Int | 5.75 | 5.27 | 4.83 | 10.58 | r230947 13 151.0 | KB882132 | 1,682,036 |
K start | 213 | add_int | 4.00 | 3.56 | 4.21 | 8.70 | r132099 2 35.1 | KB872277 | 193,967 |
K end | 195 | Add | 3.98 | 3.68 | 5.65 | 12.49 | r134839 2 97.6 | KB872296 | 1,995,763 |
K end | 195 | sex_int | 2.17 | 1.84 | 3.89 | 8.78 | r113674 6 107 | KB872052 | 163,270 |
Weight change | 213 | Int | 6.62 | 6.12 | 4.8 | 9.86 | r107738 25 87.5 | KB871991 | 413,427 |
Weight change | 213 | sex_int | 3.31 | 2.88 | 3.4 | 7.09 | r107738 25 87.5 | KB871991 | 413,427 |
% weight change | 210 | Add | 4.03 | 3.73 | 4.04 | 8.48 | r231495 13 144 | KB882132 | 577,777 |
Gonad weight | 180 | Int | 7.96 | 6.90 | 5.84 | 13.88 | r5323 1 41.8 | KB871579 | 6,548,071 |
Gonad weight | 180 | Int | 7.96 | 6.90 | 5.65 | 13.46 | r28416 19 75.4 | KB871633 | 1,033,602 |
Gonad weight | 180 | Int | 7.96 | 6.90 | 4.99 | 11.99 | r47899 22 143.9 | KB871694 | 475,774 |
Gonad weight | 180 | sex_int | 3.79 | 3.23 | 3.03 | 7.46 | r5323 1 41.8 | KB871579 | 6,548,071 |
Weight—gonad | 181 | Int | 6.76 | 6.14 | 5.3 | 12.62 | r230947 13 151 | KB882132 | 1,682,036 |
Normalized gonad | 140 | Int | 6.76 | 6.29 | 6.25 | 18.58 | r177364 1 76.5 | KB882087 | 2,900,519 |
Normalized gonad | 140 | Int | 6.76 | 6.29 | 5.37 | 16.19 | r104862 22 178.1 | KB871966 | 141,642 |
Normalized gonad | 140 | Int | 6.76 | 6.29 | 5.4 | 16.27 | r1393 24 29.5 | KB871578 | 4,785,777 |
Normalized gonad | 140 | sex_int | 3.26 | 2.97 | 3.63 | 11.26 | r177364 1 76.5 | KB882087 | 2,900,519 |
Muscle TAG | 192 | None | 4.10 | 3.70 | na | Â | Â | Â | Â |
Visceral fat area | 119 | None | 4.28 | 3.89 | na | Â | Â | Â | Â |
Liver area | 185 | add_int | 6.07 | 5.64 | 4.37 | 10.31 | r154446 7 153 | KB873184 | 12,227 |
Liver area | 185 | Int | 6.07 | 5.64 | 5.38 | 12.53 | r230914 13 150.8 | KB882132 | 1,586,871 |
Liver area | 185 | Int | 6.07 | 5.64 | 6.39 | 14.71 | r28572 19 74.2 | KB871633 | 467,313 |
Liver area | 185 | sex_int | 2.93 | 2.50 | 3.16 | 7.56 | r248014 7 153 | KB882149 | 2,507,088 |
Midgut length | 196 | sex_int | 5.09 | 4.75 | 3.43 | 7.74 | r195661 4 145 | KB882102 | 1,812,243 |
Hindgut length | 196 | add_int | 4.05 | 3.65 | 4.64 | 10.33 | r172341 10 68.3 | KB882083 | 490,666 |
Hindgut length | 196 | sex_int | 2.30 | 1.95 | 3.14 | 7.11 | r33595 6 62.4 | KB871649 | 380,272 |
R liver area | 185 | add_int | 5.81 | 5.40 | 5.62 | 13.06 | r154446 7 153 | KB873184 | 12,227 |
R liver area | 185 | sex_int | 2.79 | 2.43 | 2.95 | 7.08 | r170604 21 12.8 | KB882082 | 730,436 |
R midgut length | 194 | Add | 5.23 | 4.78 | na | Â | Â | Â | Â |
R hindgut length | 194 | add_int | 5.11 | 4.79 | 4.68 | 10.51 | r172341 10 68.3 | KB882083 | 490,666 |
R hindgut length | 194 | sex_int | 2.29 | 1.88 | 3.83 | 8.69 | r59663 4 220 | KB871744 | 301,165 |