Table 1 Sequence read data for the three groups of rainbow trout in this study
Piscivores | Insectivores | Blackwater | |
|---|---|---|---|
No. reads | 592,736,824 | 574,066,240 | 590,881,476 |
No. reads discarded | 62,411,176 | 51,402,968 | 66,731,872 |
No. duplicate reads removed | 28,161,256 | 23,892,440 | 33,282,020 |
No. reads passing QC | 502,164,392 | 498,770,832 | 490,867,584 |
No. reads mapped | 365,737,358 | 364,938,474 | 363,369,176 |
Proportion of genome covered | 0.628 | 0.633 | 0.635 |
Mean coverage after filters | 23.16 ± 5.42 | 23.06 ± 5.33 | 24.14 ± 5.86 |