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Table 2 Analysis of molecular variance (AMOVA) based on pairwise differences for Opisthopappus

From: Localized environmental heterogeneity drives the population differentiation of two endangered and endemic Opisthopappus Shih species

Source df SS MS Est. Var % Fixation Indices
SNP
 Among species 1 548.9707 548.9707 9.3417 80% FCT = 0.8003
  Among populations within species 22 96.6499 4.3932 0.5331 5% FSC = 0.2287
 Within populations 93 167.2000 1.7978 1.7978 15% FST = 0.8460
 Total 116 812.8205   11.6727 100% (P < 0.001)
InDel
 Among species 1 321.7912 321.7912 5.2026 44% FCT = 0.4364
 Among populations within species 22 402.0003 18.2727 2.9867 25% FSC = 0.4444
 Within populations 93 347.2000 3.7333 3.7333 31% FST = 0.6869
 Total 116 1070.9915   11.9226 100% (P < 0.001)
  1. FCT, genetic differentiation among groups
  2. FSC, genetic differentiation among populations within groups
  3. FST, genetic differentiation among populations