Evolutionary pattern of Macaca fascicularis in Southeast Asia inferred using Y-chromosomal gene

Table 2 Sequence characterization (as calculated using MEGA7), standard molecular diversity indices (calculated using DnaSP) as well as pairwise F_ST and genetic distances (%) among the geographical groups of M. fascicularis

Geographical Groups		N	Sequence characterization			Diversity Indices			Pairwise F_ST (below diagonal) and genetic distances (%; above diagonal)
Geographical Groups		N	CS	VS	PIS	NHap	Hd	π (10^–4)	1	2	3
1	Indochinese	34	2028	0	0	1	0	0		0.27	0.17
2	Continental Sundaic	171	2014	12	7	17	0.61	4.40	0.90		0.15
3	Insular Sundaic	27	2025	1	0	2	0.07	0.40	0.99	0.69

CS = conserved sites; VS = variable sites; PIS = parsimony-informative sites; NHap = number of haplotypes; Hd = haplotype diversity; π = nucleotide diversity

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