TY - JOUR AU - Kouba, A. AU - Petrusek, A. AU - Kozák, P. PY - 2014 DA - 2014// TI - Continental-wide distribution of crayfish species in Europe: update and maps JO - Knowl Manag Aquat Ecosyst VL - 413 UR - https://doi.org/10.1051/kmae/2014007 DO - 10.1051/kmae/2014007 ID - Kouba2014 ER - TY - BOOK PY - 2006 DA - 2006// TI - Atlas of crayfish in Europe PB - Muséum national d'Histoire naturelle CY - Paris ID - ref2 ER - TY - JOUR AU - Trontelj, P. AU - Machino, Y. AU - Sket, B. PY - 2005 DA - 2005// TI - Phylogenetic and phylogeographic relationships in the crayfish genus Austropotamobius inferred from mitochondrial COI gene sequences JO - Mol Phylogenet Evol VL - 34 UR - https://doi.org/10.1016/j.ympev.2004.09.010 DO - 10.1016/j.ympev.2004.09.010 ID - Trontelj2005 ER - TY - JOUR AU - Klobučar, G. I. V. AU - Podnar, M. AU - Jelić, M. AU - Franjević, D. AU - Faller, M. AU - Štambuk, A. PY - 2013 DA - 2013// TI - Role of the Dinaric Karst (western Balkans) in shaping the phylogeographic structure of the threatened crayfish Austropotamobius torrentium JO - Freshw Biol VL - 58 UR - https://doi.org/10.1111/fwb.12110 DO - 10.1111/fwb.12110 ID - Klobučar2013 ER - TY - JOUR AU - Pârvulescu, L. AU - Pérez-Moreno, J. L. AU - Panaiotu, C. AU - Drăguț, L. AU - Schrimpf, A. AU - Popovici, I. D. PY - 2019 DA - 2019// TI - A journey on plate tectonics sheds light on European crayfish phylogeography JO - Ecol Evol VL - 9 UR - https://doi.org/10.1002/ece3.4888 DO - 10.1002/ece3.4888 ID - Pârvulescu2019 ER - TY - JOUR AU - Maguire, I. AU - Klobučar, G. AU - Žganec, K. AU - Jelić, M. AU - Lucić, A. AU - Hudina, S. PY - 2018 DA - 2018// TI - Recent changes in distribution pattern of freshwater crayfish in Croatia—threats and perspectives JO - Knowl Manag Aquat Ecosyst VL - 419 UR - https://doi.org/10.1051/kmae/2017053 DO - 10.1051/kmae/2017053 ID - Maguire2018 ER - TY - BOOK AU - Reynolds, J. AU - Souty-Grosset, C. PY - 2011 DA - 2011// TI - Management of freshwater biodiversity: crayfish as bioindicators PB - Cambridge University Press CY - Cambridge UR - https://doi.org/10.1017/CBO9781139031790 DO - 10.1017/CBO9781139031790 ID - Reynolds2011 ER - TY - JOUR AU - Kouba, A. AU - Tikal, J. AU - Cisar, P. AU - Vesely, L. AU - Fort, M. AU - Priborsky, J. PY - 2016 DA - 2016// TI - The significance of droughts for hyporheic dwellers: evidence from freshwater crayfish JO - Sci Rep VL - 6 UR - https://doi.org/10.1038/srep26569 DO - 10.1038/srep26569 ID - Kouba2016 ER - TY - JOUR AU - Weinländer, M. AU - Füreder, L. PY - 2009 DA - 2009// TI - The continuing spread of Pacifastacus leniusculus in Carinthia (Austria) JO - Knowl Manag Aquat Ecosyst VL - 394–395 UR - https://doi.org/10.1051/kmae/20010011 DO - 10.1051/kmae/20010011 ID - Weinländer2009 ER - TY - JOUR AU - Jussila, J. AU - Vrezec, A. AU - Jaklič, T. AU - Kukkonen, H. AU - Makkonen, J. AU - Kokko, H. PY - 2017 DA - 2017// TI - Aphanomyces astaci isolate from latently infected stone crayfish (Austropotamobius torrentium) population is virulent JO - J Invertebr Pathol VL - 149 UR - https://doi.org/10.1016/j.jip.2017.07.003 DO - 10.1016/j.jip.2017.07.003 ID - Jussila2017 ER - TY - JOUR PY - 1992 DA - 1992// TI - On the conservation of natural habitats and of wild fauna and flora JO - Off J Eur Commun L VL - 269 ID - ref11 ER - TY - STD TI - Füreder L, Gherardi F, Souty-Grosset C. Austropotambius torrentium (errata version published in 2017). The IUCN Red List of Threatened Species 2010: e.T2431A121724677. Accessed on 13 Oct 2020. ID - ref12 ER - TY - STD TI - Gottstein S, Hudina S, Lucić A, Maguire I, Ternjej I, Žganec K. Crveni popis rakova (Crustacea) slatkih i bočatih voda Hrvatske. Zagreb: Državni zavod za zaštitu prirode; 2011. (Red list of freshwater and brackish Crustacea in Croatia; in Croatian). ID - ref13 ER - TY - JOUR AU - Eizaguirre, C. AU - Baltazar-Soares, M. PY - 2014 DA - 2014// TI - Evolutionary conservation—evaluating the adaptive potential of species JO - Evol Appl VL - 7 UR - https://doi.org/10.1111/eva.12227 DO - 10.1111/eva.12227 ID - Eizaguirre2014 ER - TY - JOUR AU - Darwall, W. AU - Bremerich, V. AU - Wever, A. AU - Dell, A. I. AU - Freyhof, J. PY - 2018 DA - 2018// TI - The alliance for freshwater life: a global call to unite efforts for freshwater biodiversity science and conservation JO - Aquat Conserv VL - 28 UR - https://doi.org/10.1002/aqc.2958 DO - 10.1002/aqc.2958 ID - Darwall2018 ER - TY - JOUR AU - Chiesa, S. AU - Scalici, M. AU - Negrini, R. AU - Gibertini, G. AU - Marzano, F. N. PY - 2011 DA - 2011// TI - Fine-scale genetic structure, phylogeny and systematics of threatened crayfish species complex JO - Mol Phylogenet Evol VL - 61 UR - https://doi.org/10.1016/j.ympev.2011.03.031 DO - 10.1016/j.ympev.2011.03.031 ID - Chiesa2011 ER - TY - JOUR AU - Crandall, K. A. AU - Grave, S. PY - 2017 DA - 2017// TI - An updated classification of the freshwater crayfishes (Decapoda: Astacidea) of the world, with a complete species list JO - J Crust Biol VL - 37 UR - https://doi.org/10.1093/jcbiol/rux070 DO - 10.1093/jcbiol/rux070 ID - Crandall2017 ER - TY - JOUR AU - Karaman, S. PY - 1929 DA - 1929// TI - Die Potamobiiden Jugoslaviens JO - Glasn Zemaljsk VL - 41 ID - Karaman1929 ER - TY - JOUR AU - Karaman, M. PY - 1962 DA - 1962// TI - Ein Beitrag zur Systematik der Astacidae (Decapoda) JO - Crustaceana VL - 3 UR - https://doi.org/10.1163/156854062X00409 DO - 10.1163/156854062X00409 ID - Karaman1962 ER - TY - JOUR AU - Starobogatov, Y. PY - 1996 DA - 1996// TI - Taxonomy and geographical distribution of crayfishes of Asia and East Europe (Crustacea Decapoda Astacodei) JO - Arthropoda Sel VL - 4 ID - Starobogatov1996 ER - TY - JOUR AU - Albrecht, H. PY - 1982 DA - 1982// TI - Das System der Europäischen Flusskrebse (Decapoda, Astacidae): Vorschlag und Begründung JO - Mitt Hamburg Zool Mus Inst VL - 79 ID - Albrecht1982 ER - TY - JOUR AU - Maguire, I. AU - Marn, N. AU - Klobučar, G. PY - 2017 DA - 2017// TI - Morphological evidence for hidden diversity in the threatened stone crayfish Austropotamobius torrentium (Schrank, 1803) (Decapoda: Astacoidea: Astacidae) in Croatia JO - J Crust Biol VL - 37 UR - https://doi.org/10.1093/jcbiol/ruw012 DO - 10.1093/jcbiol/ruw012 ID - Maguire2017 ER - TY - JOUR AU - Lovrenčić, L. AU - Pavić, V. AU - Majnarić, S. AU - Abramović, L. AU - Jelić, M. AU - Maguire, I. PY - 2020 DA - 2020// TI - Morphological diversity of the stone crayfish—traditional and geometric morphometric approach JO - Knowl Manag Aquat Ecosyst VL - 421 UR - https://doi.org/10.1051/kmae/2019042 DO - 10.1051/kmae/2019042 ID - Lovrenčić2020 ER - TY - CHAP AU - Wills, M. A. ED - Fortey, R. A. ED - Thomas, R. H. PY - 1998 DA - 1998// TI - Arthropod relationships BT - A phylogeny of recent and fossil Crustacea derived from morphological characters PB - Springer-Science+Business Media CY - Dordrecht ID - Wills1998 ER - TY - JOUR AU - Rudolph, E. AU - Colihueque, N. AU - Yañez, M. PY - 2016 DA - 2016// TI - Morphological and genetic analysis in morphologically divergent river and lake specimens of the freshwater crayfish Samastacus spinifrons (Philippi, 1882) (Decapoda, Parastacidae) JO - Crustaceana VL - 89 UR - https://doi.org/10.1163/15685403-00003560 DO - 10.1163/15685403-00003560 ID - Rudolph2016 ER - TY - JOUR AU - Schubart, C. D. AU - Huber, M. G. PY - 2006 DA - 2006// TI - Genetic comparisons of German populations of the stone crayfish Austropotamobius torrentium (Crustacea: Astacidae) JO - Bull Fr Pêche Piscic VL - 380–381 UR - https://doi.org/10.1051/kmae:2006008 DO - 10.1051/kmae:2006008 ID - Schubart2006 ER - TY - JOUR AU - Petrusek, A. AU - Pešek, P. AU - Leština, D. AU - Martin, P. AU - Fischer, D. AU - Kozak, P. AU - Vlach, P. PY - 2017 DA - 2017// TI - Mitochondrial DNA provides evidence of a double origin for the stone crayfish Austropotamobius torrentium in the Elbe basin JO - Limnologica VL - 62 UR - https://doi.org/10.1016/j.limno.2016.11.004 DO - 10.1016/j.limno.2016.11.004 ID - Petrusek2017 ER - TY - JOUR AU - Pârvulescu, L. PY - 2019 DA - 2019// TI - Introducing a new Austropotamobius crayfish species (Crustacea, Decapoda, Astacidae): A Miocene endemism of the Apuseni Mountains, Romania JO - Zool Anz VL - 279 UR - https://doi.org/10.1016/j.jcz.2019.01.006 DO - 10.1016/j.jcz.2019.01.006 ID - Pârvulescu2019 ER - TY - JOUR AU - Schwarzfeld, M. D. AU - Sperling, F. A. PY - 2014 DA - 2014// TI - Species delimitation using morphology, morphometrics, and molecules: definition of the Ophion scutellaris Thomson species group, with descriptions of six new species (Hymenoptera, Ichneumonidae) JO - ZooKeys VL - 462 UR - https://doi.org/10.3897/zookeys.462.8229 DO - 10.3897/zookeys.462.8229 ID - Schwarzfeld2014 ER - TY - JOUR AU - Dömel, J. S. AU - Macher, T. H. AU - Dietz, L. AU - Duncan, S. AU - Mayer, C. AU - Rozenberg, A. AU - Wolcott, K. AU - Lesse, F. AU - Melzer, R. R. PY - 2019 DA - 2019// TI - Combining morphological and genomic evidence to resolve species diversity and study speciation processes of the Pallenopsis patagonica (Pycnogonida) species complex JO - Front Zool VL - 16 UR - https://doi.org/10.1186/s12983-019-0316-y DO - 10.1186/s12983-019-0316-y ID - Dömel2019 ER - TY - JOUR AU - Schlick-Steiner, B. C. AU - Steiner, F. M. AU - Seifert, B. AU - Stauffer, C. AU - Christian, E. AU - Crozier, R. H. PY - 2010 DA - 2010// TI - Integrative taxonomy: a multisource approach to exploring biodiversity JO - Annu Rev Entomol VL - 55 UR - https://doi.org/10.1146/annurev-ento-112408-085432 DO - 10.1146/annurev-ento-112408-085432 ID - Schlick-Steiner2010 ER - TY - JOUR AU - Puillandre, N. AU - Modica, M. V. AU - Zhang, Y. AU - Sirovich, L. AU - Boisselier, M. C. AU - Cruaud, C. PY - 2012 DA - 2012// TI - Large-scale species delimitation method for hyperdiverse groups JO - Mol Ecol VL - 21 UR - https://doi.org/10.1111/j.1365-294X.2012.05559.x DO - 10.1111/j.1365-294X.2012.05559.x ID - Puillandre2012 ER - TY - JOUR AU - Crandall, K. A. AU - Harris, D. J. AU - Fetzner, J. W. PY - 2000 DA - 2000// TI - The monophyletic origin of freshwater crayfish estimated from nuclear and mitochondrial DNA sequenceses JO - Proc R Soc B Biol Sci VL - 267 UR - https://doi.org/10.1098/rspb.2000.1195 DO - 10.1098/rspb.2000.1195 ID - Crandall2000 ER - TY - JOUR AU - Grandjean, F. AU - Harris, D. J. AU - Souty-Grosset, C. AU - Crandall, K. A. PY - 2000 DA - 2000// TI - Systematics of the European endangered crayfish species Austropotamobius pallipes (Decapoda: Astacidae) JO - J Crustacean Biol VL - 20 UR - https://doi.org/10.1163/20021975-99990068 DO - 10.1163/20021975-99990068 ID - Grandjean2000 ER - TY - JOUR AU - Ahn, D. H. AU - Kawai, T. AU - Kim, S. J. AU - Rho, H. S. AU - Jung, J. W. AU - Kim, W. PY - 2006 DA - 2006// TI - Phylogeny of Northern Hemisphere freshwater crayfishes based on 16S rRNA gene analysis JO - Korean J Genet VL - 28 ID - Ahn2006 ER - TY - JOUR AU - Blair, C. AU - Bryson, R. W. PY - 2017 DA - 2017// TI - Cryptic diversity and discordance in single-locus species delimitation methods within horned lizards (Phrynosomatidae: Phrynosoma) JO - Mol Ecol Resour VL - 17 UR - https://doi.org/10.1111/1755-0998.12658 DO - 10.1111/1755-0998.12658 ID - Blair2017 ER - TY - JOUR AU - Hofmann, E. P. AU - Nicholson, K. E. AU - Luque-Montes, I. R. AU - Koehler, G. AU - Cerrato-Mendoza, C. A. AU - Medina-Flores, M. AU - Wilson, L. D. AU - Townsend, J. H. PY - 2019 DA - 2019// TI - Cryptic diversity, but to what extent? Discordance between single-locus species delimitation methods within mainland anoles (Squamata: Dactyloidae) from Northern Central America JO - Front Genet VL - 10 UR - https://doi.org/10.3389/fgene.2019.00011 DO - 10.3389/fgene.2019.00011 ID - Hofmann2019 ER - TY - JOUR AU - Harris, D. J. AU - Crandall, K. A. PY - 2010 DA - 2010// TI - Intragenomic variation within ITS1 and ITS2 of freshwater crayfishes (Decapoda: Cambaridae): Implications for phylogenetic and microsatellite studies JO - Mol Biol Evol VL - 17 UR - https://doi.org/10.1093/oxfordjournals.molbev.a026308 DO - 10.1093/oxfordjournals.molbev.a026308 ID - Harris2010 ER - TY - JOUR AU - Lefébure, T. AU - Douady, C. J. AU - Gouy, M. AU - Gibert, J. PY - 2006 DA - 2006// TI - Relationship between morphological taxonomy and molecular divergence within Crustacea: proposal of a molecular threshold to help species delimitation JO - Mol Phylogenet Evol VL - 40 UR - https://doi.org/10.1016/j.ympev.2006.03.014 DO - 10.1016/j.ympev.2006.03.014 ID - Lefébure2006 ER - TY - JOUR AU - Yao, H. AU - Song, J. AU - Liu, C. AU - Luo, K. AU - Han, J. AU - Li, Y. PY - 2010 DA - 2010// TI - Use of ITS2 region as the universal DNA barcode for plants and animals JO - PLoS ONE VL - 5 UR - https://doi.org/10.1371/journal.pone.0013102 DO - 10.1371/journal.pone.0013102 ID - Yao2010 ER - TY - JOUR AU - Coleman, A. PY - 2003 DA - 2003// TI - ITS2 is a double-edged tool for eukaryote evolutionary comparisons JO - Trends Genet VL - 19 UR - https://doi.org/10.1016/S0168-9525(03)00118-5 DO - 10.1016/S0168-9525(03)00118-5 ID - Coleman2003 ER - TY - JOUR AU - Dellicour, S. AU - Flot, J. F. PY - 2015 DA - 2015// TI - Delimiting species-poor data sets using single molecular markers: a study of barcode gaps, haplowebs and GMYC JO - Syst Biol VL - 64 UR - https://doi.org/10.1093/sysbio/syu130 DO - 10.1093/sysbio/syu130 ID - Dellicour2015 ER - TY - JOUR AU - Magyar Magyar, I. AU - Radivojević, D. AU - Sztanó, O. AU - Synak, R. AU - Ujszászi, K. AU - Pócsik, M. PY - 2013 DA - 2013// TI - Progradation of the paleo-Danube shelf margin across the Pannonian Basin during the Late Miocene and Early Pliocene JO - Glob Planet Change VL - 103 UR - https://doi.org/10.1016/j.gloplacha.2012.06.007 DO - 10.1016/j.gloplacha.2012.06.007 ID - Magyar Magyar2013 ER - TY - JOUR AU - Whitfield, J. AU - Lockhart, P. PY - 2007 DA - 2007// TI - Deciphering ancient rapid radiations JO - Trends Ecol Evol VL - 22 UR - https://doi.org/10.1016/j.tree.2007.01.012 DO - 10.1016/j.tree.2007.01.012 ID - Whitfield2007 ER - TY - JOUR AU - Humphries, E. M. AU - Winker, K. PY - 2010 DA - 2010// TI - Working through polytomies: Auklets revisited JO - Mol Phylogenet Evol VL - 54 UR - https://doi.org/10.1016/j.ympev.2009.07.023 DO - 10.1016/j.ympev.2009.07.023 ID - Humphries2010 ER - TY - JOUR AU - Berger, C. AU - Štambuk, A. AU - Maguire, I. AU - Weiss, S. AU - Füreder, L. PY - 2018 DA - 2018// TI - Integrating genetics and morphometrics in species conservation—a case study on the stone crayfish Austropotamobius torrentium JO - Limnologica VL - 69 UR - https://doi.org/10.1016/j.limno.2017.11.002 DO - 10.1016/j.limno.2017.11.002 ID - Berger2018 ER - TY - JOUR AU - Bláha, M. AU - Uzhytchak, M. AU - Bondarenko, V. AU - Policar, T. PY - 2017 DA - 2017// TI - The least known European native crayfish Astacus pachypus (Rathke, 1837) revealed its phylogenetic position JO - Zool Anz VL - 267 UR - https://doi.org/10.1016/j.jcz.2017.03.001 DO - 10.1016/j.jcz.2017.03.001 ID - Bláha2017 ER - TY - JOUR AU - Bernini, G. AU - Bellati, A. AU - Pellegrino, I. AU - Negri, A. AU - Ghia, D. AU - Fea, G. AU - Sacchi, R. AU - Nardi, P. AU - Fasola, M. AU - Galeotti, P. PY - 2016 DA - 2016// TI - Complexity of biogeographic pattern in the endangered crayfish Austropotamobius italicus in northern Italy: molecular insights of conservation concern JO - Conserv Genet VL - 17 UR - https://doi.org/10.1007/s10592-015-0767-4 DO - 10.1007/s10592-015-0767-4 ID - Bernini2016 ER - TY - JOUR AU - Dawkins, K. L. AU - Furse, J. M. AU - Wild, C. H. AU - Hughes, J. M. PY - 2017 DA - 2017// TI - A novel genus and cryptic species harboured within the monotypic freshwater crayfish genus Tenuibranchiurus Riek, 1951 (Decapoda: Parastacidae) JO - PeerJ VL - 5 UR - https://doi.org/10.7717/peerj.3310 DO - 10.7717/peerj.3310 ID - Dawkins2017 ER - TY - JOUR AU - Laggis, A. AU - Baxevanism, A. D. AU - Charalampidou, A. AU - Maniatsi, S. AU - Triantafyllidis, A. AU - Abatzopoulos, T. J. PY - 2017 DA - 2017// TI - Microevolution of the noble crayfish (Astacus astacus) in the Southern Balkan Peninsula JO - BMC Evol Biol VL - 17 UR - https://doi.org/10.1186/s12862-017-0971-6 DO - 10.1186/s12862-017-0971-6 ID - Laggis2017 ER - TY - JOUR AU - Economidis, P. S. AU - Banarescu, P. M. PY - 1991 DA - 1991// TI - The distribution and origins of freshwater fishes in the Balkan peninsula, especially in Greece JO - Int Revue Ges Hydrobiol VL - 76 UR - https://doi.org/10.1002/iroh.19910760209 DO - 10.1002/iroh.19910760209 ID - Economidis1991 ER - TY - JOUR AU - Flot, J. F. AU - Wörheide, G. AU - Dattagupta, S. PY - 2010 DA - 2010// TI - Unsuspected diversity of Niphargus amphipods in the chemoautotrophic cave ecosystem of Frasassi, central Italy JO - BMC Evol Biol VL - 10 UR - https://doi.org/10.1186/1471-2148-10-171 DO - 10.1186/1471-2148-10-171 ID - Flot2010 ER - TY - JOUR AU - Silva, J. M. AU - Creer, S. AU - Santos, A. AU - Costa, A. C. AU - Cunha, M. R. AU - Costa, F. O. AU - Carvalho, G. R. PY - 2011 DA - 2011// TI - Systematic and evolutionary insights derived from mtDNA COI barcode diversity in the Decapoda (Crustacea: Malacostraca JO - PLoS ONE VL - 6 UR - https://doi.org/10.1371/journal.pone.0019449 DO - 10.1371/journal.pone.0019449 ID - Silva2011 ER - TY - JOUR AU - Delić, T. AU - Trontelj, P. AU - Rendoš, M. AU - Fišer, C. PY - 2017 DA - 2017// TI - The importance of naming cryptic species and the conservation of endemic subterranean amphipods JO - Sci Rep VL - 7 UR - https://doi.org/10.1038/s41598-017-02938-z DO - 10.1038/s41598-017-02938-z ID - Delić2017 ER - TY - JOUR AU - Carstens, B. C. AU - Pelletier, T. A. AU - Reid, N. M. AU - Satler, J. D. PY - 2013 DA - 2013// TI - How to fail at species delimitation JO - Mol Ecol VL - 22 UR - https://doi.org/10.1111/mec.12413 DO - 10.1111/mec.12413 ID - Carstens2013 ER - TY - JOUR AU - Guo, L. AU - Sui, Z. AU - Zhang, S. AU - Ren, Y. AU - Liu, Y. PY - 2015 DA - 2015// TI - Comparison of potential diatom ‘barcode’genes (the 18S rRNA gene and ITS, COI, rbcL) and their effectiveness in discriminating and determining species taxonomy in the Bacillariophyta JO - Int J Syst Evol Microbiol VL - 65 UR - https://doi.org/10.1099/ijs.0.000076 DO - 10.1099/ijs.0.000076 ID - Guo2015 ER - TY - JOUR AU - Allio, R. AU - Donega, S. AU - Galtier, N. AU - Nabholz, B. PY - 2017 DA - 2017// TI - Large variation in the ratio of mitochondrial to nuclear mutation rate across animals: implications for genetic diversity and the use of mitochondrial DNA as a molecular marker JO - Mol Biol Evol VL - 34 UR - https://doi.org/10.1093/molbev/msx197 DO - 10.1093/molbev/msx197 ID - Allio2017 ER - TY - JOUR AU - Lukhtanov, V. A. PY - 2019 DA - 2019// TI - Species delimitation and analysis of cryptic species diversity in the XXI century JO - Entomol Rev VL - 99 UR - https://doi.org/10.1134/S0013873819040055 DO - 10.1134/S0013873819040055 ID - Lukhtanov2019 ER - TY - JOUR AU - Simmons, M. P. AU - Ochoterena, H. AU - Carr, T. G. PY - 2001 DA - 2001// TI - Incorporation, relative homoplasy, and effect of gap characters in sequence-based phylogenetic analyses JO - Syst Biol VL - 50 UR - https://doi.org/10.1080/106351501300318049 DO - 10.1080/106351501300318049 ID - Simmons2001 ER - TY - JOUR AU - Chu, K. H. AU - Li, C. P. AU - Ho, H. Y. PY - 2001 DA - 2001// TI - The first internal transcribed spacer (ITS-1) of ribosomal DNA as a molecular marker for phylogenetic and population analyses in Crustacea JO - Mar Biotechnol VL - 3 UR - https://doi.org/10.1007/s10126001-0014-5 DO - 10.1007/s10126001-0014-5 ID - Chu2001 ER - TY - JOUR AU - Jelić, M. AU - Klobučar, G. I. AU - Grandjean, F. AU - Puillandre, N. AU - Franjević, D. AU - Futo, M. PY - 2016 DA - 2016// TI - Insights into the molecular phylogeny and historical biogeography of the white-clawed crayfish (Decapoda, Astacidae) JO - Mol Phylogenet Evol VL - 103 UR - https://doi.org/10.1016/j.ympev.2016.07.009 DO - 10.1016/j.ympev.2016.07.009 ID - Jelić2016 ER - TY - JOUR AU - Rocha, G. M. AU - Martinelli, A. B. AU - Utz, L. R. P. AU - Fernandes, L. F. L. PY - 2019 DA - 2019// TI - Using internal transcribed spacers for Calanoida (Crustacea, Copepoda) species identification JO - Mar Biodivers VL - 49 UR - https://doi.org/10.1007/s12526-018-0902-9 DO - 10.1007/s12526-018-0902-9 ID - Rocha2019 ER - TY - JOUR AU - Larson, E. R. AU - Castelin, M. AU - Williams, B. W. AU - Olden, J. D. AU - Abbott, C. L. PY - 2016 DA - 2016// TI - Phylogenetic species delimitation for crayfishes of the genus Pacifastacus JO - PeerJ VL - 4 UR - https://doi.org/10.7717/peerj.1915 DO - 10.7717/peerj.1915 ID - Larson2016 ER - TY - JOUR AU - Previšić, A. AU - Walton, C. AU - Kučinić, M. AU - Mitrikeski, P. AU - Kerovec, M. PY - 2009 DA - 2009// TI - Pleistocene divergence of Dinaric Drusus endemics (Trichoptera, Limnephilidae) in multiple microrefugia within the Balkan Peninsula JO - Mol Ecol VL - 18 UR - https://doi.org/10.1111/j.1365-294X.2008.04046.x DO - 10.1111/j.1365-294X.2008.04046.x ID - Previšić2009 ER - TY - JOUR AU - Vitecek, S. AU - Kučinić, M. AU - Previšić, A. AU - Živić, I. AU - Stojanović, K. AU - Keresztes, L. PY - 2017 DA - 2017// TI - Integrative taxonomy by molecular species delimitation: multi-locus data corroborate a new species of Balkan Drusinae micro-endemics JO - BMC Evol Biol VL - 17 UR - https://doi.org/10.1186/s12862-017-0972-5 DO - 10.1186/s12862-017-0972-5 ID - Vitecek2017 ER - TY - CHAP AU - Banarescu, P. M. ED - Griffiths, H. I. ED - Krystufek, B. ED - Reed, J. M. PY - 2004 DA - 2004// TI - Distribution pattern of the aquatic fauna of the Balkan Peninsula BT - Balkan biodiversity: pattern and process in the European hotspot PB - Springer CY - Dordrecht UR - https://doi.org/10.1007/978-1-4020-2854-0_12 DO - 10.1007/978-1-4020-2854-0_12 ID - Banarescu2004 ER - TY - JOUR AU - Bilandžija, H. AU - Morton, B. AU - Podnar, M. AU - Ćetković, H. PY - 2013 DA - 2013// TI - Evolutionary history of relict Congeria (Bivalvia: Dreissenidae): unearthing the subterranean biodiversity of the Dinaric Karst JO - Front Zool VL - 10 UR - https://doi.org/10.1186/1742-9994-10-5 DO - 10.1186/1742-9994-10-5 ID - Bilandžija2013 ER - TY - JOUR AU - Previšić, A. AU - Schnitzler, J. AU - Kučinić, M. AU - Graf, W. AU - Ibrahimi, H. AU - Kerovec, M. AU - Pauls, S. PY - 2014 DA - 2014// TI - Microscale vicariance and diversification of Western Balkan caddisflies linked to karstification JO - Freshw Sci VL - 33 UR - https://doi.org/10.1086/674430 DO - 10.1086/674430 ID - Previšić2014 ER - TY - BOOK AU - Pullaiah, T. PY - 2019 DA - 2019// TI - Global biodiversity: selected countries in Europe, vol. 2 PB - CRC Press CY - Boca Raton ID - Pullaiah2019 ER - TY - CHAP AU - Hewitt, G. M. ED - Zachos, F. ED - Habel, J. PY - 2011 DA - 2011// TI - Mediterranean peninsulas: the evolution of hotspots BT - Biodiversity hotspots PB - Springer CY - Berlin UR - https://doi.org/10.1007/978-3-642-20992-5_7 DO - 10.1007/978-3-642-20992-5_7 ID - Hewitt2011 ER - TY - CHAP AU - Seghedi, I. ED - Cook, N. J. ED - Ciobanu, C. L. PY - 2004 DA - 2004// TI - Geological evolution of the Apuseni Mountains with emphasis on the Neogene magmatism—a review BT - Au–Ag–telluride deposits of the Golden Quadrilateral, Apuseni Mts., Romania. Guidebook of the International Field Workshop project PB - IGCP CY - Alba Iulia ID - Seghedi2004 ER - TY - JOUR AU - Reiser, M. K. AU - Schuster, R. AU - Spikings, R. AU - Tropper, P. AU - Fügenschuh, B. PY - 2017 DA - 2017// TI - From nappe stacking to exhumation: Cretaceous tectonics in the Apuseni Mountains (Romania) JO - Int J Geol Earth Sci VL - 106 UR - https://doi.org/10.1007/s00531-016-1335-y DO - 10.1007/s00531-016-1335-y ID - Reiser2017 ER - TY - JOUR AU - Leeuw, A. AU - Mandic, O. AU - Krijgsman, W. AU - Kuiper, K. AU - Hrvatović, H. PY - 2012 DA - 2012// TI - Paleomagnetic and geochronologic constraints on the geodynamic evolution of the Central Dinarides JO - Tectonophysics VL - 530 UR - https://doi.org/10.1016/j.tecto.2012.01.004 DO - 10.1016/j.tecto.2012.01.004 ID - Leeuw2012 ER - TY - JOUR AU - Mandic, O. AU - Kurečić, T. AU - Neubauer, T. AU - Harzhauser, M. PY - 2015 DA - 2015// TI - Stratigraphic and paleogeographic significance of lacustrine mollusks from the Pliocene Viviparus beds in central Croatia JO - Geol Croat VL - 68 UR - https://doi.org/10.4154/GC.2015.15 DO - 10.4154/GC.2015.15 ID - Mandic2015 ER - TY - JOUR AU - Rögl, F. PY - 1996 DA - 1996// TI - Stratigraphic correlation of the Paratethys Oligocene and Miocene JO - Mitteilungen Ges Geol Bergbaustudenten Österreich VL - 41 ID - Rögl1996 ER - TY - JOUR AU - Magyar, I. AU - Geary, D. H. AU - Müller, P. PY - 1999 DA - 1999// TI - Paleogeographic evolution of the Late Miocene Lake Pannon in Central Europe JO - Palaeogeogr Palaeoclimatol Palaeoecol VL - 147 UR - https://doi.org/10.1016/S0031-0182(98)00155-2 DO - 10.1016/S0031-0182(98)00155-2 ID - Magyar1999 ER - TY - JOUR AU - Magyar, I. AU - Lantos, M. AU - Ujszaszi, K. AU - Kordos, L. PY - 2007 DA - 2007// TI - Magnetostratigraphic, seismic and biostratigraphic correlations of the Upper Miocene sediments in the Nortwestern Pannonian Basin system JO - Geol Carpath VL - 58 ID - Magyar2007 ER - TY - JOUR AU - Magyar, I. AU - Radivojević, D. AU - Sztanó, O. AU - Synak, R. AU - Ujszászi, K. AU - Pócsik, M. PY - 2013 DA - 2013// TI - Progradation of the paleo-Danube shelf margin across the Pannonian Basin during the Late Miocene and Early Pliocene JO - Glob Planet Change VL - 103 UR - https://doi.org/10.1016/j.gloplacha.2012.06.007 DO - 10.1016/j.gloplacha.2012.06.007 ID - Magyar2013 ER - TY - JOUR AU - Borgh, M. AU - Vasiliev, I. AU - Stoica, M. AU - Knežević, S. AU - Matenco, L. AU - Krijgsman, W. PY - 2013 DA - 2013// TI - The isolation of the Pannonian basin (Central Paratethys): new constraints from magnetostratigraphy and biostratigraphy JO - Glob Planet Change VL - 103 UR - https://doi.org/10.1016/j.gloplacha.2012.10.001 DO - 10.1016/j.gloplacha.2012.10.001 ID - Borgh2013 ER - TY - JOUR AU - Harzhauser, M. AU - Latal, C. AU - Piller, W. E. PY - 2007 DA - 2007// TI - The stable isotope archive of Lake Pannon as a mirror of Late Miocene climate change JO - Palaeogeogr Palaeoclimatol Palaeoecol VL - 249 UR - https://doi.org/10.1016/j.palaeo.2007.02.006 DO - 10.1016/j.palaeo.2007.02.006 ID - Harzhauser2007 ER - TY - JOUR AU - Krijgsman, W. AU - Hilgen, F. J. AU - Raffi, I. AU - Sierro, F. J. AU - Wilson, D. S. PY - 1999 DA - 1999// TI - Chronology, causes and progression of the Messinian salinity crisis JO - Nature VL - 400 UR - https://doi.org/10.1038/23231 DO - 10.1038/23231 ID - Krijgsman1999 ER - TY - JOUR AU - Krijgsman, W. AU - Stoica, M. AU - Vasiliev, I. AU - Popov, V. V. PY - 2010 DA - 2010// TI - Rise and fall of the Paratethys Sea during the Messinian Salinity Crisis JO - Earth Planet Sci Lett VL - 290 UR - https://doi.org/10.1016/j.epsl.2009.12.020 DO - 10.1016/j.epsl.2009.12.020 ID - Krijgsman2010 ER - TY - JOUR AU - Murphy, L. N. AU - Kirk-Davidoff, D. B. AU - Mahowald, N. AU - Otto-Bliesner, B. L. PY - 2009 DA - 2009// TI - A numerical study of the climate response to lowered Mediterranean Sea level during the Messinian Salinity Crisis JO - Palaeogeogr Palaeoclimatol Palaeoecol VL - 279 UR - https://doi.org/10.1016/j.palaeo.2009.04.016 DO - 10.1016/j.palaeo.2009.04.016 ID - Murphy2009 ER - TY - JOUR AU - Borgh, M. AU - Radivojević, D. AU - Matenco, L. PY - 2015 DA - 2015// TI - Constraining forcing factors and relative sea-level fluctuations in semi-enclosed basins: the Late Neogene demise of Lake Pannon JO - Basin Res VL - 27 UR - https://doi.org/10.1111/bre.12094 DO - 10.1111/bre.12094 ID - Borgh2015 ER - TY - JOUR AU - Leever, K. A. AU - Matenco, L. AU - Rabagia, T. AU - Cloetingh, S. AU - Krijgsman, W. AU - Stoica, M. PY - 2010 DA - 2010// TI - Messinian sea level fall in the Dacic Basin (Eastern Paratethys): palaeogeographical implications from seismic sequence stratigraphy JO - Terra Nova VL - 22 UR - https://doi.org/10.1111/j.1365-3121.2009.00910.x DO - 10.1111/j.1365-3121.2009.00910.x ID - Leever2010 ER - TY - JOUR AU - Clauzon, G. AU - Suc, J. P. AU - Popescu, S. M. AU - Marunteanu, M. AU - Rubino, J. L. AU - Marinescu, F. AU - Melinte, M. C. PY - 2005 DA - 2005// TI - Influence of Mediterranean sea-level changes on the Dacic Basin (Eastern Paratethys) during the late Neogene: the Mediterranean Lago Mare facies deciphered JO - Basin Res VL - 17 UR - https://doi.org/10.1111/j.1365-2117.2005.00269.x DO - 10.1111/j.1365-2117.2005.00269.x ID - Clauzon2005 ER - TY - CHAP AU - Gomez, A. AU - Lunt, D. H. ED - Weiss, S. ED - Ferrand, N. PY - 2007 DA - 2007// TI - Refugia within refugia: patterns of phylogeographic concordance in the Iberian Peninsula BT - Phylogeography of Southern European Refugia PB - Springer CY - Dordrecht UR - https://doi.org/10.1007/1-4020-4904-8_5 DO - 10.1007/1-4020-4904-8_5 ID - Gomez2007 ER - TY - JOUR AU - Saftić, B. AU - Velić, J. AU - Sztano, O. AU - Juhasz, G. AU - Ivković, Ž. PY - 2003 DA - 2003// TI - Tertiary subsurface facies, source rocks and hydrocarbon reservoirs in the SW part of the Pannonian Basin (northern Croatia and south-western Hungary) JO - Geol Croat VL - 56 ID - Saftić2003 ER - TY - CHAP AU - Ehlers, J. AU - Gibbard, P. ED - Singh, V. ED - Singh, P. ED - Haritashya, U. PY - 2011 DA - 2011// TI - Quaternary glaciation BT - Encyclopedia of snow, ice and glaciers PB - Springer CY - Cambridge UR - https://doi.org/10.1007/978-90-481-2642-2_423 DO - 10.1007/978-90-481-2642-2_423 ID - Ehlers2011 ER - TY - JOUR AU - Borgh, M. AU - Stoica, M. AU - Donselaar, M. E. PY - 2014 DA - 2014// TI - Miocene connectivity between the Central and Eastern Paratethys: constraints from the western Dacian Basin JO - Palaeogeogr Palaeoclimatol Palaeoecol VL - 412 UR - https://doi.org/10.1016/j.palaeo.2014.07.016 DO - 10.1016/j.palaeo.2014.07.016 ID - Borgh2014 ER - TY - JOUR AU - Haywood, A. M. AU - Sellwood, B. W. AU - Valdes, P. J. PY - 2000 DA - 2000// TI - Regional warming: Pliocene (3 Ma) paleoclimate of Europe and the Mediterranean JO - Geology VL - 28 UR - https://doi.org/2.0.CO;2 DO - 2.0.CO;2 ID - Haywood2000 ER - TY - JOUR AU - Neubauer, T. A. AU - Harzhauser, M. AU - Kroh, A. AU - Georgopoulou, E. AU - Mandic, O. PY - 2015 DA - 2015// TI - A gastropod-based biogeographic scheme for the European Neogene freshwater systems JO - Earth-Sci Rev VL - 143 UR - https://doi.org/10.1016/j.earscirev.2015.01.010 DO - 10.1016/j.earscirev.2015.01.010 ID - Neubauer2015 ER - TY - JOUR AU - Herbert, T. D. AU - Lawrence, K. T. AU - Tzanova, A. AU - Peterson, L. C. AU - Caballero-Gill, R. AU - Kelly, C. S. PY - 2016 DA - 2016// TI - Late Miocene global cooling and the rise of modern ecosystems JO - Nat Geosci VL - 9 UR - https://doi.org/10.1038/ngeo2813 DO - 10.1038/ngeo2813 ID - Herbert2016 ER - TY - JOUR AU - Erdei, B. AU - Hably, L. AU - Kázmér, M. AU - Utescher, T. AU - Bruch, A. A. PY - 2007 DA - 2007// TI - Neogene flora and vegetation development of the Pannonian domain in relation to palaeoclimate and palaeogeography JO - Palaeogeogr Palaeoclimatol Palaeoecol VL - 253 UR - https://doi.org/10.1016/j.palaeo.2007.03.036 DO - 10.1016/j.palaeo.2007.03.036 ID - Erdei2007 ER - TY - JOUR AU - Hewitt, G. M. PY - 1999 DA - 1999// TI - Post-glacial re-colonization of European biota JO - Biol J Linn Soc VL - 68 UR - https://doi.org/10.1111/j.1095-8312.1999.tb01160.x DO - 10.1111/j.1095-8312.1999.tb01160.x ID - Hewitt1999 ER - TY - BOOK AU - Weiss, S. AU - Ferrand, N. PY - 2007 DA - 2007// TI - Phylogeography of southern European refugia: Evolutionary perspectives on the origins and conservation of European biodiversity PB - Springer CY - Dordrecht UR - https://doi.org/10.1007/1-4020-4904-8 DO - 10.1007/1-4020-4904-8 ID - Weiss2007 ER - TY - JOUR AU - Luo, A. AU - Ling, C. AU - Ho, S. AU - Zhu, C. PY - 2018 DA - 2018// TI - Comparison of methods for molecular species delimitation across a range of speciation scenarios JO - Syst Biol VL - 67 UR - https://doi.org/10.1093/sysbio/syy011 DO - 10.1093/sysbio/syy011 ID - Luo2018 ER - TY - JOUR AU - Jacobs, S. J. AU - Kristofferson, C. AU - Uribe-Convers, S. AU - Latvis, M. AU - Tank, D. C. PY - 2018 DA - 2018// TI - Incongruence in molecular species delimitation schemes: what to do when adding more data is difficult JO - Mol Ecol VL - 27 UR - https://doi.org/10.1111/mec.14590 DO - 10.1111/mec.14590 ID - Jacobs2018 ER - TY - JOUR AU - Loretán, G. AU - Rueda, E. C. AU - Cabrera, J. M. AU - Pérez-Losada, M. AU - Collins, P. A. AU - Giri, F. PY - 2020 DA - 2020// TI - Geographical isolation and restricted gene flow drive speciation of Aegla singularis (Decapoda: Anomura: Aeglidae) in southern South America JO - Biol J Linn Soc VL - 129 UR - https://doi.org/10.1093/biolinnean/blz148 DO - 10.1093/biolinnean/blz148 ID - Loretán2020 ER - TY - JOUR AU - Nantarat, N. AU - Sutcharit, C. AU - Tongkerd, P. AU - Wade, C. M. AU - Naggs, F. AU - Panha, S. PY - 2019 DA - 2019// TI - Phylogenetics and species delimitations of the operculated land snail Cyclophorus volvulus (Gastropoda: Cyclophoridae) reveal cryptic diversity and new species in Thailand JO - Sci Rep VL - 9 UR - https://doi.org/10.1038/s41598-019-43382-5 DO - 10.1038/s41598-019-43382-5 ID - Nantarat2019 ER - TY - JOUR AU - Puillandre, N. AU - Lambert, A. AU - Brouillet, S. AU - Achaz, G. PY - 2012 DA - 2012// TI - ABGD, Automatic Barcode Gap Discovery for primary species delimitation JO - Mol Ecol VL - 21 UR - https://doi.org/10.1111/j.1365-294X.2011.05239.x DO - 10.1111/j.1365-294X.2011.05239.x ID - Puillandre2012 ER - TY - JOUR AU - Fujisawa, T. AU - Barraclough, T. G. PY - 2013 DA - 2013// TI - Delimiting species using single-locus data and the generalized mixed yule coalescent approach: a revised method and evaluation on simulated data sets JO - Syst Biol VL - 62 UR - https://doi.org/10.1093/sysbio/syt033 DO - 10.1093/sysbio/syt033 ID - Fujisawa2013 ER - TY - JOUR AU - Talavera, G. AU - Dincă, V. AU - Vila, R. PY - 2013 DA - 2013// TI - Factors affecting species delimitations with the GMYC model: insights from a butterfly survey JO - Methods Ecol Evol VL - 4 UR - https://doi.org/10.1111/2041-210X.12107 DO - 10.1111/2041-210X.12107 ID - Talavera2013 ER - TY - JOUR AU - Tang, C. Q. AU - Humphreys, A. M. AU - Fontaneto, D. AU - Barraclough, T. G. PY - 2014 DA - 2014// TI - Effects of phylogenetic reconstruction method on the robustness of species delimitation using single-locus data JO - Methods Ecol Evol VL - 5 UR - https://doi.org/10.1111/2041-210X.12246 DO - 10.1111/2041-210X.12246 ID - Tang2014 ER - TY - JOUR AU - Ahrens, D. AU - Fujisawa, T. AU - Krammer, H. J. AU - Eberle, J. AU - Fabrizi, S. AU - Vogler, A. P. PY - 2016 DA - 2016// TI - Rarity and incomplete sampling in DNA-based species delimitation JO - Syst Biol VL - 65 UR - https://doi.org/10.1093/sysbio/syw002 DO - 10.1093/sysbio/syw002 ID - Ahrens2016 ER - TY - JOUR AU - Dellicour, S. AU - Flot, J. PY - 2018 DA - 2018// TI - The hitchhiker's guide to single locus species delimitation JO - Mol Ecol Resour VL - 18 UR - https://doi.org/10.1111/1755-0998.12908 DO - 10.1111/1755-0998.12908 ID - Dellicour2018 ER - TY - JOUR AU - Sukumaran, J. AU - Lacey, K. L. PY - 2017 DA - 2017// TI - Multispecies coalescent delimits structure, not species JO - Proc Natl Acad Sci U S A VL - 114 UR - https://doi.org/10.1073/pnas.1607921114 DO - 10.1073/pnas.1607921114 ID - Sukumaran2017 ER - TY - JOUR AU - Gu, Q. H. AU - Husemann, M. AU - Wu, H. H. AU - Dong, J. AU - Zhou, C. J. AU - Wang, X. F. PY - 2019 DA - 2019// TI - Phylogeography of Bellamya (Mollusca: Gastropoda: Viviparidae) snails on different continents: contrasting patterns of diversification in China and East Africa JO - BMC Evol Biol VL - 19 UR - https://doi.org/10.1186/s12862-019-1397-0 DO - 10.1186/s12862-019-1397-0 ID - Gu2019 ER - TY - JOUR AU - Scalici, M. AU - Bravi, R. PY - 2012 DA - 2012// TI - Solving alpha-diversity by morphological markers contributes to arranging the systematic status of a crayfish species complex (Crustacea, Decapoda) JO - J Zool Syst Evol Res VL - 50 UR - https://doi.org/10.1111/j.1439-0469.2011.00643.x DO - 10.1111/j.1439-0469.2011.00643.x ID - Scalici2012 ER - TY - JOUR AU - Taberlet, P. AU - Fumagalli, L. AU - Wust-Saucy, A. G. AU - Cosson, J. F. PY - 1998 DA - 1998// TI - Comparative phylogeography and postglacial colonization routes in Europe JO - Mol Ecol VL - 7 UR - https://doi.org/10.1046/j.1365-294x.1998.00289.x DO - 10.1046/j.1365-294x.1998.00289.x ID - Taberlet1998 ER - TY - CHAP AU - Breinholt, J. AU - Pérez-Losada, M. AU - Crandall, K. A. ED - Martin, J. W. ED - Crandall, K. A. ED - Felder, D. L. PY - 2009 DA - 2009// TI - The timing of the diversification of the freshwater crayfishes BT - Decapod Crustacean Phylogenetics (Crustacean issue 18) PB - CRC Press CY - Boca Raton UR - https://doi.org/10.1201/9781420092592-c17 DO - 10.1201/9781420092592-c17 ID - Breinholt2009 ER - TY - JOUR AU - Silva-Brandão, K. AU - Almeida, L. AU - Moraes, S. AU - Cônsoli, F. PY - 2013 DA - 2013// TI - Using population genetic methods to identify the origin of an invasive population and to diagnose cryptic subspecies of Telchin licus (Lepidoptera: Castniidae) JO - Bull Entomol Res VL - 103 UR - https://doi.org/10.1017/S0007485312000430 DO - 10.1017/S0007485312000430 ID - Silva-Brandão2013 ER - TY - JOUR AU - Vorburger, C. AU - Herzog, J. AU - Rouchet, R. PY - 2017 DA - 2017// TI - Aphid specialization on different summer hosts is associated with strong genetic differentiation and unequal symbiont communities despite a common mating habitat JO - J Evol Biol VL - 30 UR - https://doi.org/10.1111/jeb.13040 DO - 10.1111/jeb.13040 ID - Vorburger2017 ER - TY - JOUR AU - Dong, Y. AU - Jiang, J. AU - Yuan, Z. AU - Zhao, Q. AU - Qiu, J. PY - 2020 DA - 2020// TI - Population genetic structure reveals two lineages of Amynthas triastriatus (Oligochaeta: Megascolecidae) in China, with notes on a new subspecies of Amynthas triastriatus JO - Int J Environ Res Public Health VL - 17 UR - https://doi.org/10.3390/ijerph17051538 DO - 10.3390/ijerph17051538 ID - Dong2020 ER - TY - JOUR AU - Souty-Grosset, C. AU - Reynolds, J. PY - 2009 DA - 2009// TI - Current ideas on methodological approaches in European crayfish conservation and restocking procedures JO - Knowl Manag Aquat Ecosyst VL - 394–395 UR - https://doi.org/10.1051/kmae/2009021 DO - 10.1051/kmae/2009021 ID - Souty-Grosset2009 ER - TY - JOUR AU - Ryder, O. A. PY - 1986 DA - 1986// TI - Species conservation and systematics: the dilemma of subspecies JO - Trends Ecol Evol VL - 1 UR - https://doi.org/10.1016/0169-5347(86)90059-5 DO - 10.1016/0169-5347(86)90059-5 ID - Ryder1986 ER - TY - JOUR AU - Bláha, M. AU - Žurovcová, M. AU - Kouba, A. AU - Policar, T. AU - Kozák, P. PY - 2016 DA - 2016// TI - Founder event and its effect on genetic variation in translocated populations of noble crayfish (Astacus astacus) JO - J Appl Genet VL - 57 UR - https://doi.org/10.1007/s13353-015-0296-3 DO - 10.1007/s13353-015-0296-3 ID - Bláha2016 ER - TY - JOUR AU - Schrimpf, A. AU - Piscione, M. AU - Cammaerts, R. AU - Collas, M. AU - Herman, D. AU - Jung, A. PY - 2017 DA - 2017// TI - Genetic characterization of Western European noble crayfish populations (Astacus astacus) for advanced conservation management strategies JO - Conserv Genet VL - 18 UR - https://doi.org/10.1007/s10592-017-0981-3 DO - 10.1007/s10592-017-0981-3 ID - Schrimpf2017 ER - TY - JOUR AU - Hughes, J. M. AU - Schmidt, D. J. AU - Finn, D. S. PY - 2009 DA - 2009// TI - Genes in streams: using DNA to understand the movement of freshwater fauna and their riverine habitat JO - Bioscience VL - 59 UR - https://doi.org/10.1525/bio.2009.59.7.8 DO - 10.1525/bio.2009.59.7.8 ID - Hughes2009 ER - TY - JOUR AU - Gross, R. AU - Palm, S. AU - Koiv, K. AU - Prestegaard, T. AU - Jussila, J. AU - Paaver, T. PY - 2013 DA - 2013// TI - Microsatellite markers reveal clear geographic structuring among threatened noble crayfish (Astacus astacus) populations in Northern and Central Europe JO - Conserv Genet VL - 14 UR - https://doi.org/10.1007/s10592-013-0476-9 DO - 10.1007/s10592-013-0476-9 ID - Gross2013 ER - TY - JOUR AU - Katoh, K. AU - Standley, D. M. PY - 2013 DA - 2013// TI - MAFFT multiple sequence alignment software Version 7: improvements in performance and usability JO - Mol Biol Evol VL - 30 UR - https://doi.org/10.1093/molbev/mst010 DO - 10.1093/molbev/mst010 ID - Katoh2013 ER - TY - JOUR AU - Buhay, J. E. PY - 2009 DA - 2009// TI - “COI-like” sequences are becoming problematic in molecular systematic and DNA barcoding studies JO - J Crustac Biol VL - 29 UR - https://doi.org/10.1651/08-3020.1 DO - 10.1651/08-3020.1 ID - Buhay2009 ER - TY - JOUR AU - Kumar, S. AU - Stecher, G. AU - Li, M. AU - Knyaz, C. AU - Tamura, K. PY - 2018 DA - 2018// TI - MEGA X: molecular evolutionary genetics analysis across computing platforms JO - Mol Biol Evol VL - 35 UR - https://doi.org/10.1093/molbev/msy096 DO - 10.1093/molbev/msy096 ID - Kumar2018 ER - TY - JOUR AU - Rozas, J. AU - Ferrer-Mata, A. AU - Sánchez-DelBarrio, J. C. AU - Guirao-Rico, S. AU - Librado, P. AU - Ramos-Onsins, S. E. PY - 2017 DA - 2017// TI - DnaSP 6: DNA sequence polymorphism analysis of large data sets JO - Mol Biol Evol VL - 34 UR - https://doi.org/10.1093/molbev/msx248 DO - 10.1093/molbev/msx248 ID - Rozas2017 ER - TY - JOUR AU - Farris, J. AU - Källersjö, M. AU - Kluge, A. AU - Bult, C. PY - 1994 DA - 1994// TI - Testing significance of incongruence JO - Cladistics VL - 10 UR - https://doi.org/10.1111/j.1096-0031.1994.tb00181.x DO - 10.1111/j.1096-0031.1994.tb00181.x ID - Farris1994 ER - TY - STD TI - Swofford DL. PAUP*. Phylogenetic Analysis Using Parsimony (*and Other Methods). Version 4.0b10. Sunderland: Sinauer Associates; 2002. ID - ref126 ER - TY - JOUR AU - Bandelt, H. J. AU - Forster, P. AU - Röhl, A. PY - 1999 DA - 1999// TI - Median-joining networks for inferring intraspecic phylogenies JO - Mol Biol Evol VL - 16 UR - https://doi.org/10.1093/oxfordjournals.molbev.a026036 DO - 10.1093/oxfordjournals.molbev.a026036 ID - Bandelt1999 ER - TY - JOUR AU - Leigh, J. W. AU - Bryant, D. PY - 2015 DA - 2015// TI - POPART: full-feature software for haplotype network construction JO - Methods Ecol Evol VL - 6 UR - https://doi.org/10.1111/2041-210X.12410 DO - 10.1111/2041-210X.12410 ID - Leigh2015 ER - TY - JOUR AU - Clement, M. AU - Posada, D. AU - Crandall, K. PY - 2000 DA - 2000// TI - TCS: a computer program to estimate gene genealogies JO - Mol Ecol VL - 9 UR - https://doi.org/10.1046/j.1365-294x.2000.01020.x DO - 10.1046/j.1365-294x.2000.01020.x ID - Clement2000 ER - TY - JOUR AU - Múrias dos Santos, A. AU - Cabezas, M. AU - Tavares, A. AU - Xavier, R. AU - Branco, M. PY - 2016 DA - 2016// TI - tcsBU: a tool to extend TCS network layout and visualization JO - Bioinformatics VL - 32 UR - https://doi.org/10.1093/bioinformatics/btv636 DO - 10.1093/bioinformatics/btv636 ID - Múrias dos Santos2016 ER - TY - JOUR AU - Fourment, M. AU - Gibbs, M. J. PY - 2006 DA - 2006// TI - PATRISTIC: a program for calculating patristic distances and graphically comparing the components of genetic change JO - BMC Evol Biol VL - 6 UR - https://doi.org/10.1186/1471-2148-6-1 DO - 10.1186/1471-2148-6-1 ID - Fourment2006 ER - TY - JOUR AU - Bouckaert, R. AU - Vaughan, T. G. AU - Barido-Sottani, J. AU - Duchêne, S. AU - Fourment, M. AU - Gavryushkina, A. PY - 2019 DA - 2019// TI - BEAST 2.5: an advanced software platform for Bayesian evolutionary analysis JO - PLoS Comput Biol. VL - 15 UR - https://doi.org/10.1371/journal.pcbi.1006650 DO - 10.1371/journal.pcbi.1006650 ID - Bouckaert2019 ER - TY - STD TI - Miller MA, Pfeiffer W, Schwartz T. Creating the CIPRES Science Gateway for inference of large phylogenetic trees. New Orleans: proceedings of the gateway computing environments workshop (GCE); 2010. p. 1–8. ID - ref133 ER - TY - JOUR AU - Brower, A. PY - 1994 DA - 1994// TI - Rapid morphological radiation and convergence among races of the butterfly Heliconus erato inferred from patterns of mitochondrial DNA evolution JO - Proc Natl Acad Sci VL - 91 UR - https://doi.org/10.1073/pnas.91.14.6491 DO - 10.1073/pnas.91.14.6491 ID - Brower1994 ER - TY - JOUR AU - Bauzà-Ribot, M. M. AU - Jaume, D. AU - Forno’s, J. J. AU - Juan, C. AU - Pons, J. PY - 2011 DA - 2011// TI - Islands beneath islands: phylogeography of a groundwater amphipod crustacean in the Balearic archipelago JO - BMC Evol Biol. VL - 11 UR - https://doi.org/10.1186/1471-2148-11-221 DO - 10.1186/1471-2148-11-221 ID - Bauzà-Ribot2011 ER - TY - JOUR AU - Knowlton, N. AU - Weigt, L. A. PY - 1998 DA - 1998// TI - New dates and new rates for divergence across the Isthmus of Panama JO - Proc R Soc Lond B Biol Sci VL - 265 UR - https://doi.org/10.1098/rspb.1998.0568 DO - 10.1098/rspb.1998.0568 ID - Knowlton1998 ER - TY - JOUR AU - Schubart, C. D. AU - Diesel, R. AU - Hedges, S. PY - 1998 DA - 1998// TI - Rapid evolution to terrestrial life in Jamaican crabs JO - Nature VL - 393 UR - https://doi.org/10.1038/30724 DO - 10.1038/30724 ID - Schubart1998 ER - TY - CHAP AU - Pavelić, D. AU - Belak, M. ED - McCann, T. PY - 2008 DA - 2008// TI - Dinarids in north Croatia and Bosnia BT - The Geology of Central Europe Volume 2 Mesozoic and Cenozoic PB - Geological Society CY - London ID - Pavelić2008 ER - TY - JOUR AU - Pons, J. AU - Barraclough, T. G. AU - Gomez-Zurita, J. AU - Cardoso, A. AU - Duran, D. P. AU - Hazell, S. PY - 2006 DA - 2006// TI - Sequence-based species delimitation for the DNA taxonomy of undescribed insects JO - Syst Biol VL - 55 UR - https://doi.org/10.1080/10635150600852011 DO - 10.1080/10635150600852011 ID - Pons2006 ER - TY - JOUR AU - Zhang, J. AU - Kapli, P. AU - Pavlidis, P. AU - Stamatakis, A. PY - 2013 DA - 2013// TI - A general species delimitation method with applications to phylogenetic placements JO - Bioinformatics VL - 29 UR - https://doi.org/10.1093/bioinformatics/btt499 DO - 10.1093/bioinformatics/btt499 ID - Zhang2013 ER - TY - JOUR AU - Kapli, P. AU - Lutteropp, S. AU - Zhang, J. AU - Kobert, K. AU - Pavlidis, P. AU - Stamatakis, A. AU - Flouri, T. PY - 2017 DA - 2017// TI - Multi-rate Poisson tree processes for single-locus species delimitation under maximum likelihood and Markov chain Monte Carlo JO - Bioinformatics VL - 33 ID - Kapli2017 ER - TY - STD TI - Ezard T, Fujisawa T, Barraclough T. R package splits: SPecies’ LImits by Threshold Statistics, version 1.0–18/r45. 2009. ID - ref142 ER - TY - JOUR AU - Heled, J. AU - Drummond, A. J. PY - 2010 DA - 2010// TI - Bayesian inference of species trees from multilocus data JO - Mol Biol Evol VL - 27 UR - https://doi.org/10.1093/molbev/msp274 DO - 10.1093/molbev/msp274 ID - Heled2010 ER - TY - JOUR AU - Modica, M. V. AU - Puillandre, N. AU - Castelin, M. AU - Zhang, Y. AU - Holford, M. PY - 2014 DA - 2014// TI - A good compromise: rapid and robust species proxies for inventorying biodiversity hotspots using the Terebridae (Gastropoda: Conoidea) JO - PLoS ONE VL - 9 UR - https://doi.org/10.1371/journal.pone.0102160 DO - 10.1371/journal.pone.0102160 ID - Modica2014 ER - TY - JOUR AU - Grummer, J. A. AU - Bryson, R. W. AU - Reeder, T. W. PY - 2013 DA - 2013// TI - Species delimitation using Bayes factors: simulations and application to the Sceloporus scalaris species group (Squamata: Phrynosomatidae) JO - Syst Biol. VL - 63 UR - https://doi.org/10.1093/sysbio/syt069 DO - 10.1093/sysbio/syt069 ID - Grummer2013 ER - TY - JOUR AU - Russel, P. M. AU - Brewer, B. J. AU - Klaere, S. AU - Bouckaert, R. R. PY - 2018 DA - 2018// TI - Model selection and parameter inference in phylogenetics using nested sampling JO - Syst Biol VL - 68 UR - https://doi.org/10.1093/sysbio/syy050 DO - 10.1093/sysbio/syy050 ID - Russel2018 ER - TY - JOUR AU - Kass, R. E. AU - Raftery, A. E. PY - 1995 DA - 1995// TI - Bayes factors JO - J Am Stat Assoc VL - 90 UR - https://doi.org/10.1080/01621459.1995.10476572 DO - 10.1080/01621459.1995.10476572 ID - Kass1995 ER -