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Table 2 Allele frequencies at each Patr locus in the pooled cohort of chimpanzeesa

From: Similar patterns of genetic diversity and linkage disequilibrium in Western chimpanzees (Pan troglodytes verus) and humans indicate highly conserved mechanisms of MHC molecular evolution

Locus DPB1 Locus DQB1 Locus DQA1b Locus DRB1 Locus B Locus C Locus A
N = 44 N = 48 N = 29 N = 46 N = 51 N = 51 N = 50
DPB1*01:09 0.279 DQB1*03:02 0.5937 DQA1*20:04 0.4138 DRB1*02:01 0.2283 B*01:01 0.2807 C*04:01 0.3075 A*03:01 0.1505
DPB1*01:11 0.2514 DQB1*06:02 0.2917 DQA1*01:01 0.2759 DRB1*02:04 0.2283 B*05:01 0.1764 C*06:01 0.2629 A*04:01 0.126
DPB1*01:12 0.1705 DQB1*06:01 0.0521 DQA1*05:02 0.1552 DRB1*03:07 0.1528 B*13:01 0.0784 C*09:01 0.1211 A*09:01 0.126
DPB1*01:07 0.1073 DQB1*15:01 0.0312 DQA1*20:01 0.1034 DRB1*03:02 0.0913 B*24:02 0.0783 C*02:03 0.0686 A*07:01 0.1193
DPB1*01:13 0.1023 DQB1*03:05 0.0208 DQA1*05:03 0.0517 DRB1*03:05 0.087 B*17:01 0.0686 C*11:01 0.049 A*01:01 0.0983
DPB1*01:18 0.0114 DQB1*06:07 0.0104    DRB1*03:09 0.0462 B*14:01 0.0588 C*05:01 0.0392 A*14:01 0.07
DPB1*03:04 0.0114      DRB1*10:01 0.0435 B*24:01 0.0392 C*12:01 0.033 A*06:01 0.0668
blank 0.0668      DRB1*03:11 0.0326 B*04:01 0.0294 C*03:01 0.0196 A*05:01 0.0422
       DRB1*07:01 0.0217 B*16:01 0.0294 C*05:02 0.0196 A*02:01 0.0319
       blank 0.0684 B*20:01 0.0294 C*01:01 0.0114 A*11:01 0.03
         B*03:01 0.0214 C*02:02 0.0098 A*06:02 0.0106
         B*09:01 0.0214 C*08:01 0.0098 A*03:02 0.01
         B*29:01 0.0196 C*09:02 0.0098 A*04:02 0.01
         B*05:02 0.0098 C*13:02 0.0098 A*04:04 0.01
         B*08:02 0.0098 blank 0.0288 A*08:02 0.01
         B*10:01 0.0098    A*08:03 0.01
         B*16:02 0.0098    A*17:01 0.01
         B*19:01 0.0098    blank 0.0683
         B*22:01 0.0098     
         B*23:01 0.0098     
         blank 0.0002     
  1. Alleles in grey have a frequency lower than 0.05
  2. aThe allele frequencies for the individual chimpanzee cohorts are in Additional Table S1
  3. bFor locus DQA1, only data for cohort BPRCwb are available