Table 2 All ten possible pairwise DGE comparisons with the total number of DEG and enriched GO terms for each. Also indicated is whether each comparison is informative for contrasting each EOD feature. The phenotypes for waveform polarity can only be contrasted in comparisons where both OTUs have penetrations. Informative comparisons for each EOD feature (Set A’) are marked with an * in the column of the EOD feature they contrasted
From: The transcriptional correlates of divergent electric organ discharges in Paramormyrops electric fish
Comparison | Contrast | DE Genes | enriched GO terms | |||||
|---|---|---|---|---|---|---|---|---|
OTU #1 | OTU #2 | Duration | Complexity | Polarity | BP | CC | MF | |
P. kingsleyae (N-type) | P. kingsleyae (P-type) | no | yes* | NA (no) | 530 | 46 | 12 | 17 |
P. kingsleyae (N-type) | P. sp. ‘magnostipes type I’ | no | yes | NA (no) | 1542 | 76 | 15 | 37 |
P. kingsleyae (N-type) | P. sp. ‘magnostipes type II’ | no | yes | NA (no) | 1174 | 71 | 16 | 25 |
P. kingsleyae (N-type) | P. sp. ‘SN3’ | yes* | no | NA (no) | 507 | 52 | 4 | 13 |
P. kingsleyae (P-type) | P. sp. ‘magnostipes type I’ | no | no | yes* | 1322 | 40 | 12 | 25 |
P. kingsleyae (P-type) | P. sp. ‘magnostipes type II’ | no | no | no | 719 | 47 | 10 | 24 |
P. kingsleyae (P-type) | P. sp. ‘SN3’ | yes | yes | NA (no) | 385 | 33 | 3 | 14 |
P. sp. ‘magnostipes type I’ | P. sp. ‘magnostipes type II’ | no | no | yes | 9 | 5 | 1 | 1 |
P. sp. ‘magnostipes type I’ | P. sp. ‘SN3’ | yes | yes | NA (no) | 1053 | 43 | 6 | 27 |
P. sp. ‘magnostipes type II’ | P. sp. ‘SN3’ | yes | yes | NA (no) | 489 | 40 | 9 | 16 |