Fig. 2

Phylogenetic analysis. a Part of the phylogenetic tree based on 291 core genes present in 109 mycobacteria (see also Additional file 4: Figure S2a). *Mark the mycobacterial type strains for which the genomes were sequenced in the present study. b Phylogenetic tree based on 2226 core genes predicted to be present in all 17 mycobacteria. In (a) and (b) the percentage values in the nodes represent boot strap values generated by 1000 cycles. c Classification of the 17 mycobacteria using Jspecies. The dendogram show ANI values after clustering using unsupervised hierarchical clustering