Table 1 The regulatory Mpc1 genes annotated in the current study. Hordeum genes were detected in IPK Barley BLAST Server, Triticum and Aegilops genes were detected in International URGI database
From: Structural and functional divergence of the Mpc1 genes in wheat and barley
Gene | Previously designation | Organism | Chromosome | Contig |
|---|---|---|---|---|
HvMpc1-H1 | HvAnt1, HvC1 | Hordeum vulgare | 7HS | morex_contig_137164 |
TuMpc1-A1 | – | Triticum urartu | 7AS | TGAC_WGS_urartu_v1_contig_231166 |
TmMpc1-A1 | – | Triticum monococcum | 7AS | TGAC_WGS_monococcum_v1_contig_12604 |
AespMpc1-S1 | – | Aegilops speltoides | 7SS | TGAC_WGS_speltoides_v1_contig_38854 |
AetMpc1-D1 | – | Aegilops tauschii | 7DS | TGAC_WGS_tauschii_v1_contig_93382 |
TdMpc1-A1 | – | Triticum durum | 7AS | TGAC_WGS_durum_v1_contig_176466 |
TdMpc1-B1 | – | Triticum durum | 7BS | TGAC_WGS_durum_v1_contig_203087 |
TaMpc1-A1 | TaC1-A1 | Triticum aestivum | 7AS | IWGSC_chr7AS_ab_k71_contigs_longerthan_200_4108742 |
TaMpc1-B1 | TaC1-B1 | Triticum aestivum | 7BS | IWGSC_chr7BS_ab_k71_contigs_longerthan_200_3084267 |
TaMpc1-D1 | TaC1-D1 | Triticum aestivum | 7DS | IWGSC_chr7DS_ab_k71_contigs_longerthan_200_2723852 |
HvMpc1-H2 | HvMpc2, HvPL1 | Hordeum vulgare | 4HL | morex_contig_317820 |
TuMpc1-A2 | – | Triticum urartu | 4AL | TGAC_WGS_urartu_v1_contig_39917 |
TmMpc1-A2 | – | Triticum monococcum | 4AL | TGAC_WGS_monococcum_v1_contig_152763 |
AeshMpc1-S2 | – | Aegilops sharonensis | 4SL | TSL_WGS_sharonensis_v1_contig_100032 |
AetMpc1-D2 | – | Aegilops tauschii | 4DL | TGAC_WGS_tauschii_v1_contig_117718 |
TdMpc1-A2 | – | Triticum durum | 4AL | TGAC_WGS_strongfield_v1_contig_168597 |
TdMpc1-B2 | – | Triticum durum | 4BL | TGAC_WGS_durum_v1_contig_401905 |
TaMpc1-A2 | – | Triticum aestivum | 5AL | TGACv1_scaffold_374597_5AL |
TaMpc1-B2 | TaPL1–4B1 | Triticum aestivum | 4BL | IWGSC_chr4BL_ab_k71_contigs_longerthan_200_6843762 |
TaMpc1-D2 | TaPL1–4D1 | Triticum aestivum | 4DL | IWGSC_chr4DL_V3_ab_k71_contigs_longerthan_200_14366448 |
HvMpc1-H3 | – | Hordeum vulgare | 4HL | morex_contig_1560519 |
TmMpc1-A3 | – | Triticum monococcum | 4AL | TGAC_WGS_monococcum_v1_contig_908028 |
AetMpc1-D3 | – | Aegilops tauschii | 4DL | TGAC_WGS_tauschii_v1_contig_1005499 |
TaMpc1-D3 | TaPL1–4D3 | Triticum aestivum | 4DL | IWGSC_chr4DL_V3_ab_k71_contigs_longerthan_200_14406147 |
AeshMpc1-S4 | – | Aegilops sharonensis | 4SL | TSL_WGS_sharonensis_v1_contig_92163 |
TaMpc1-D4 | TaPL1–4D2 | Triticum aestivum | 4DL | IWGSC_chr4DL_V3_ab_k71_contigs_longerthan_200_14366997 |