VERTEBRATA | ||
version | mean | loss (%) |
RAW | 65.64% | NA |
RAW (long) | 68.85% | NA |
HMM | 65.23% | 5.61 |
HMM-L | 65.41% | 4.22 |
HMM-LS | 65.58% | 2.68 |
PREQUAL | 65.73% | 3.06 |
BMGE | 64.83% | 4.83 |
TrimAl | 65.28% | 1.8 |
HMM Random | 64.56% | 5.61 |
HMM + BMGE | 63.94% | 13.38 |
HMM + TrimAl | 62.90% | 13.76 |
MIN | 68.71% | 0.71 |
MIN + HMM | 68.67% | 6.43 |
MAMMALIA | ||
version | mean | loss (%) |
RAW (NT) | 63.19% | NA |
RAW (NT long) | 69.77% | NA |
HMM (NT) | 66.29% | 2.92 |
HMM-L (NT) | 66.13% | 2.57 |
HMM-LS (NT) | 65.75% | 2.12 |
PREQUAL (NT) | 64.77% | 2.92 |
BMGE (NT) | 63.59% | 3.16 |
TrimAl (NT) | 63.77% | 3.76 |
HMM Random (NT) | 62.59% | 2.92 |
HMM + BMGE (NT) | 66.56% | 4.7 |
HMM + TrimAl (NT) | 66.45% | 5.16 |
RAW (AA) | 45.29% | NA |
RAW (AA long) | 53.59% | NA |
HMM (AA) | 46.98% | 2.92 |
HMM-L (AA) | 46.65% | 2.57 |
HMM-LS (AA) | 46.48% | 2.12 |
PREQUAL (AA) | 45.63% | 2.92 |
BMGE (AA) | 45.45% | 3.16 |
TrimAl (AA) | 45.36% | 3.76 |
HMM Random (AA) | 44.56% | 2.92 |
HMM + BMGE (AA) | 46.52% | 4.7 |
HMM + TrimAl (AA) | 46.64% | 5.16 |