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Table 3 Detection of positive selection in the presence of primary sequence errors

From: Evaluating the usefulness of alignment filtering methods to reduce the impact of errors on evolutionary inferences

 

Raw

HmmCleaner

PREQUAL

BMGE

TrimAl

MSAs with positive selection in a targeted sequence

8.28%

3.88%

2.67%

7.24%

7.15%

MSAs with positive selection in a targeted sequence with an error

95.69%

7.76%

13.62%

95.00%

94.74%