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Fig. 3 | BMC Evolutionary Biology

Fig. 3

From: Evaluating the usefulness of alignment filtering methods to reduce the impact of errors on evolutionary inferences

Fig. 3

Impact of the length and number of primary sequence errors, and of the prokaryotic lineage, on sensitivity (a,c,e) and specificity (b,d,f) of HmmCleaner used with the default scoring matrix. a,b. Effect of primary sequence error length. c,d. Effect of the number of primary sequence errors. e,f. Effect of the prokaryotic lineage. Box-plots were computed across all considered MSAs and values are means averaged over the different conditions of simulation

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BMC Ecology and Evolution

ISSN: 2730-7182

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