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Table 1 Positively and negatively selected codon sites in different domains of IFI16-like PYHIN gene, obtained through FEL, FUBAR and MEME analysis

From: Nature of selection varies on different domains of IFI16-like PYHIN genes in ruminants

Domain

Total codons

FEL

FUBAR

MEME

Codons under pervasive diversifying selection

Codons under pervasive purifying selection

Codons under pervasive diversifying selection

Codons under pervasive purifying selection

Codons under episodic diversifying selection

PYD

88 (1–88)

3, 15, 19, 26, 29, 63

3, 15, 26, 63

ID

218 (89–306)

234

113, 198, 301

91, 93, 105, 120, 218, 226, 233, 234, 250, 285

113, 198

234

HIN

203 (307–509)

344

320, 338, 357, 391, 420, 459

344, 398, 451, 458, 496

320, 357, 459

344, 451, 496